Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prdm4Q80V63 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prdm4Q80V63 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Prdm4Q80V63 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Prdm4Q80V63 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Prdm4Q80V63 Gm9397-201ENSMUST00000200125 605 ntBASIC23.78■■□□□ 1.4
Prdm4Q80V63 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.78■■□□□ 1.4
Prdm4Q80V63 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Prdm4Q80V63 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Prdm4Q80V63 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Prdm4Q80V63 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prdm4Q80V63 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Prdm4Q80V63 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prdm4Q80V63 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Prdm4Q80V63 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prdm4Q80V63 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Prdm4Q80V63 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.75■■□□□ 1.39
Prdm4Q80V63 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Prdm4Q80V63 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prdm4Q80V63 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Prdm4Q80V63 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Prdm4Q80V63 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Prdm4Q80V63 Gm24970-201ENSMUST00000175582 82 ntBASIC23.73■■□□□ 1.39
Prdm4Q80V63 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.73■■□□□ 1.39
Prdm4Q80V63 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Prdm4Q80V63 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Prdm4Q80V63 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Prdm4Q80V63 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.72■■□□□ 1.39
Prdm4Q80V63 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Prdm4Q80V63 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Prdm4Q80V63 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.7■■□□□ 1.38
Prdm4Q80V63 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Prdm4Q80V63 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prdm4Q80V63 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Prdm4Q80V63 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Prdm4Q80V63 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Prdm4Q80V63 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.66■■□□□ 1.38
Prdm4Q80V63 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Prdm4Q80V63 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prdm4Q80V63 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Prdm4Q80V63 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Prdm4Q80V63 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.64■■□□□ 1.37
Prdm4Q80V63 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Prdm4Q80V63 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.64■■□□□ 1.37
Prdm4Q80V63 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Prdm4Q80V63 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prdm4Q80V63 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Prdm4Q80V63 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
Prdm4Q80V63 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Prdm4Q80V63 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Prdm4Q80V63 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.62■■□□□ 1.37
Prdm4Q80V63 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.62■■□□□ 1.37
Prdm4Q80V63 Gm45855-201ENSMUST00000212546 880 ntBASIC23.62■■□□□ 1.37
Prdm4Q80V63 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Prdm4Q80V63 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Prdm4Q80V63 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prdm4Q80V63 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.61■■□□□ 1.37
Prdm4Q80V63 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prdm4Q80V63 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Prdm4Q80V63 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.6■■□□□ 1.37
Prdm4Q80V63 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.6■■□□□ 1.37
Prdm4Q80V63 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Prdm4Q80V63 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Prdm4Q80V63 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.6■■□□□ 1.37
Prdm4Q80V63 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prdm4Q80V63 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prdm4Q80V63 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prdm4Q80V63 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Prdm4Q80V63 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Prdm4Q80V63 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Prdm4Q80V63 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.58■■□□□ 1.37
Prdm4Q80V63 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prdm4Q80V63 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Prdm4Q80V63 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Prdm4Q80V63 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prdm4Q80V63 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Prdm4Q80V63 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.55■■□□□ 1.36
Prdm4Q80V63 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prdm4Q80V63 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prdm4Q80V63 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prdm4Q80V63 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Prdm4Q80V63 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prdm4Q80V63 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Prdm4Q80V63 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prdm4Q80V63 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prdm4Q80V63 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prdm4Q80V63 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prdm4Q80V63 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prdm4Q80V63 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prdm4Q80V63 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.52■■□□□ 1.36
Prdm4Q80V63 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prdm4Q80V63 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms