Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vma21Q78T54 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vma21Q78T54 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vma21Q78T54 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vma21Q78T54 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vma21Q78T54 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vma21Q78T54 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vma21Q78T54 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vma21Q78T54 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vma21Q78T54 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.61■□□□□ 0.57
Vma21Q78T54 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vma21Q78T54 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vma21Q78T54 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vma21Q78T54 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vma21Q78T54 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vma21Q78T54 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vma21Q78T54 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Vma21Q78T54 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vma21Q78T54 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Vma21Q78T54 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vma21Q78T54 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vma21Q78T54 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vma21Q78T54 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vma21Q78T54 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.58■□□□□ 0.56
Vma21Q78T54 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vma21Q78T54 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vma21Q78T54 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vma21Q78T54 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vma21Q78T54 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vma21Q78T54 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Vma21Q78T54 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Vma21Q78T54 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vma21Q78T54 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Vma21Q78T54 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Vma21Q78T54 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Vma21Q78T54 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Vma21Q78T54 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Vma21Q78T54 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Vma21Q78T54 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Vma21Q78T54 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Vma21Q78T54 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vma21Q78T54 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vma21Q78T54 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vma21Q78T54 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vma21Q78T54 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vma21Q78T54 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vma21Q78T54 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21Q78T54 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21Q78T54 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21Q78T54 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21Q78T54 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vma21Q78T54 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vma21Q78T54 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vma21Q78T54 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Vma21Q78T54 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Vma21Q78T54 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Vma21Q78T54 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vma21Q78T54 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vma21Q78T54 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21Q78T54 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Vma21Q78T54 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vma21Q78T54 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21Q78T54 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vma21Q78T54 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.48■□□□□ 0.55
Vma21Q78T54 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.48■□□□□ 0.55
Vma21Q78T54 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vma21Q78T54 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Vma21Q78T54 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.47■□□□□ 0.55
Vma21Q78T54 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21Q78T54 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vma21Q78T54 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vma21Q78T54 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21Q78T54 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21Q78T54 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21Q78T54 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vma21Q78T54 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21Q78T54 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21Q78T54 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Vma21Q78T54 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vma21Q78T54 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Vma21Q78T54 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.44■□□□□ 0.54
Vma21Q78T54 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21Q78T54 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21Q78T54 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Vma21Q78T54 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Vma21Q78T54 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21Q78T54 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Vma21Q78T54 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vma21Q78T54 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21Q78T54 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Vma21Q78T54 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Vma21Q78T54 Nkain2-201ENSMUST00000092602 558 ntBASIC18.43■□□□□ 0.54
Vma21Q78T54 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms