Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rif1Q6PR54 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rif1Q6PR54 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rif1Q6PR54 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rif1Q6PR54 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rif1Q6PR54 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rif1Q6PR54 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rif1Q6PR54 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rif1Q6PR54 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.02■□□□□ 0.8
Rif1Q6PR54 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Rif1Q6PR54 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.01■□□□□ 0.79
Rif1Q6PR54 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rif1Q6PR54 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rif1Q6PR54 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20■□□□□ 0.79
Rif1Q6PR54 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20■□□□□ 0.79
Rif1Q6PR54 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Rif1Q6PR54 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20■□□□□ 0.79
Rif1Q6PR54 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rif1Q6PR54 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20■□□□□ 0.79
Rif1Q6PR54 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20■□□□□ 0.79
Rif1Q6PR54 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.99■□□□□ 0.79
Rif1Q6PR54 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rif1Q6PR54 Gm29257-201ENSMUST00000186115 639 ntBASIC19.98■□□□□ 0.79
Rif1Q6PR54 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rif1Q6PR54 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rif1Q6PR54 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rif1Q6PR54 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rif1Q6PR54 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rif1Q6PR54 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rif1Q6PR54 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rif1Q6PR54 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rif1Q6PR54 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rif1Q6PR54 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rif1Q6PR54 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rif1Q6PR54 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rif1Q6PR54 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.95■□□□□ 0.78
Rif1Q6PR54 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rif1Q6PR54 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rif1Q6PR54 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rif1Q6PR54 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rif1Q6PR54 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rif1Q6PR54 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rif1Q6PR54 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rif1Q6PR54 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.93■□□□□ 0.78
Rif1Q6PR54 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rif1Q6PR54 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.93■□□□□ 0.78
Rif1Q6PR54 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rif1Q6PR54 Etf1-202ENSMUST00000180351 108 ntBASIC19.92■□□□□ 0.78
Rif1Q6PR54 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rif1Q6PR54 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rif1Q6PR54 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Rif1Q6PR54 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rif1Q6PR54 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
Rif1Q6PR54 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rif1Q6PR54 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rif1Q6PR54 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rif1Q6PR54 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rif1Q6PR54 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rif1Q6PR54 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rif1Q6PR54 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rif1Q6PR54 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rif1Q6PR54 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rif1Q6PR54 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rif1Q6PR54 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rif1Q6PR54 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rif1Q6PR54 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.87■□□□□ 0.77
Rif1Q6PR54 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rif1Q6PR54 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.87■□□□□ 0.77
Rif1Q6PR54 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rif1Q6PR54 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rif1Q6PR54 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.86■□□□□ 0.77
Rif1Q6PR54 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rif1Q6PR54 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rif1Q6PR54 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.86■□□□□ 0.77
Rif1Q6PR54 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rif1Q6PR54 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.84■□□□□ 0.77
Rif1Q6PR54 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rif1Q6PR54 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rif1Q6PR54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.84■□□□□ 0.77
Rif1Q6PR54 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rif1Q6PR54 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.83■□□□□ 0.76
Rif1Q6PR54 Gm9847-201ENSMUST00000052528 599 ntBASIC19.83■□□□□ 0.76
Rif1Q6PR54 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rif1Q6PR54 Gm30023-201ENSMUST00000197970 889 ntBASIC19.82■□□□□ 0.76
Rif1Q6PR54 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rif1Q6PR54 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rif1Q6PR54 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rif1Q6PR54 Gm10232-201ENSMUST00000089221 720 ntBASIC19.81■□□□□ 0.76
Rif1Q6PR54 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.81■□□□□ 0.76
Rif1Q6PR54 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rif1Q6PR54 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rif1Q6PR54 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.8■□□□□ 0.76
Rif1Q6PR54 Gm8495-201ENSMUST00000188740 694 ntBASIC19.8■□□□□ 0.76
Rif1Q6PR54 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rif1Q6PR54 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rif1Q6PR54 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rif1Q6PR54 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.79■□□□□ 0.76
Rif1Q6PR54 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.78■□□□□ 0.76
Rif1Q6PR54 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rif1Q6PR54 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms