Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.51■■□□□ 1.03
Trim45Q6PFY8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim45Q6PFY8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim45Q6PFY8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim45Q6PFY8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Trim45Q6PFY8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim45Q6PFY8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
Trim45Q6PFY8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim45Q6PFY8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim45Q6PFY8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trim45Q6PFY8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trim45Q6PFY8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.47■■□□□ 1.03
Trim45Q6PFY8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim45Q6PFY8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim45Q6PFY8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim45Q6PFY8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Trim45Q6PFY8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.46■■□□□ 1.03
Trim45Q6PFY8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim45Q6PFY8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim45Q6PFY8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim45Q6PFY8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim45Q6PFY8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim45Q6PFY8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Trim45Q6PFY8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Trim45Q6PFY8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.43■■□□□ 1.02
Trim45Q6PFY8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Trim45Q6PFY8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Trim45Q6PFY8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim45Q6PFY8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trim45Q6PFY8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.42■■□□□ 1.02
Trim45Q6PFY8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trim45Q6PFY8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim45Q6PFY8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trim45Q6PFY8 Gm6311-201ENSMUST00000073790 878 ntBASIC21.41■■□□□ 1.02
Trim45Q6PFY8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim45Q6PFY8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Trim45Q6PFY8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Trim45Q6PFY8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim45Q6PFY8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trim45Q6PFY8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Trim45Q6PFY8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trim45Q6PFY8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim45Q6PFY8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim45Q6PFY8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.39■■□□□ 1.01
Trim45Q6PFY8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.39■■□□□ 1.01
Trim45Q6PFY8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trim45Q6PFY8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trim45Q6PFY8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.38■■□□□ 1.01
Trim45Q6PFY8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trim45Q6PFY8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim45Q6PFY8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim45Q6PFY8 Mir6538-201ENSMUST00000183713 110 ntBASIC21.38■■□□□ 1.01
Trim45Q6PFY8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trim45Q6PFY8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trim45Q6PFY8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.37■■□□□ 1.01
Trim45Q6PFY8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trim45Q6PFY8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim45Q6PFY8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim45Q6PFY8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim45Q6PFY8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trim45Q6PFY8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trim45Q6PFY8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trim45Q6PFY8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim45Q6PFY8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim45Q6PFY8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.34■■□□□ 1.01
Trim45Q6PFY8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trim45Q6PFY8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trim45Q6PFY8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trim45Q6PFY8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trim45Q6PFY8 Gm4799-201ENSMUST00000095396 657 ntBASIC21.33■■□□□ 1.01
Trim45Q6PFY8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trim45Q6PFY8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trim45Q6PFY8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trim45Q6PFY8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.32■■□□□ 1
Trim45Q6PFY8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Trim45Q6PFY8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.32■■□□□ 1
Trim45Q6PFY8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.31■■□□□ 1
Trim45Q6PFY8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.31■■□□□ 1
Trim45Q6PFY8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim45Q6PFY8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Trim45Q6PFY8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trim45Q6PFY8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim45Q6PFY8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim45Q6PFY8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.3■■□□□ 1
Trim45Q6PFY8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim45Q6PFY8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trim45Q6PFY8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim45Q6PFY8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms