Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Kdm3aQ6PCM1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm3aQ6PCM1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Kdm3aQ6PCM1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Kdm3aQ6PCM1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.04■■■□□ 2.08
Kdm3aQ6PCM1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Kdm3aQ6PCM1 Gm16437-201ENSMUST00000025669 507 ntBASIC28.03■■■□□ 2.08
Kdm3aQ6PCM1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Kdm3aQ6PCM1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Kdm3aQ6PCM1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Kdm3aQ6PCM1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Kdm3aQ6PCM1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28■■■□□ 2.07
Kdm3aQ6PCM1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Kdm3aQ6PCM1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28■■■□□ 2.07
Kdm3aQ6PCM1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Kdm3aQ6PCM1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Kdm3aQ6PCM1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Terc-201ENSMUST00000082862 423 ntBASIC27.97■■■□□ 2.07
Kdm3aQ6PCM1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm3aQ6PCM1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm3aQ6PCM1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Kdm3aQ6PCM1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.95■■■□□ 2.07
Kdm3aQ6PCM1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
Kdm3aQ6PCM1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.95■■■□□ 2.06
Kdm3aQ6PCM1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Kdm3aQ6PCM1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Kdm3aQ6PCM1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.91■■■□□ 2.06
Kdm3aQ6PCM1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Kdm3aQ6PCM1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Kdm3aQ6PCM1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm3aQ6PCM1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm3aQ6PCM1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Kdm3aQ6PCM1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Kdm3aQ6PCM1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Kdm3aQ6PCM1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Kdm3aQ6PCM1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.87■■■□□ 2.05
Kdm3aQ6PCM1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Kdm3aQ6PCM1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Kdm3aQ6PCM1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Kdm3aQ6PCM1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.85■■■□□ 2.05
Kdm3aQ6PCM1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Kdm3aQ6PCM1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Kdm3aQ6PCM1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm3aQ6PCM1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm3aQ6PCM1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.83■■■□□ 2.05
Kdm3aQ6PCM1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.82■■■□□ 2.04
Kdm3aQ6PCM1 Cap2-205ENSMUST00000225824 1634 ntBASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Kdm3aQ6PCM1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Kdm3aQ6PCM1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
Kdm3aQ6PCM1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Kdm3aQ6PCM1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Kdm3aQ6PCM1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Kdm3aQ6PCM1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.76■■■□□ 2.03
Kdm3aQ6PCM1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Kdm3aQ6PCM1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Kdm3aQ6PCM1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms