Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Traf4Q61382 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Traf4Q61382 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Traf4Q61382 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Traf4Q61382 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Traf4Q61382 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Traf4Q61382 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Traf4Q61382 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Traf4Q61382 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Traf4Q61382 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Traf4Q61382 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Traf4Q61382 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Traf4Q61382 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Traf4Q61382 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Traf4Q61382 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Traf4Q61382 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Traf4Q61382 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Traf4Q61382 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Traf4Q61382 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.1■□□□□ 0.81
Traf4Q61382 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Traf4Q61382 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Traf4Q61382 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Traf4Q61382 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Traf4Q61382 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Traf4Q61382 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Traf4Q61382 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.09■□□□□ 0.81
Traf4Q61382 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Traf4Q61382 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Traf4Q61382 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.08■□□□□ 0.81
Traf4Q61382 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Traf4Q61382 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Traf4Q61382 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Traf4Q61382 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Traf4Q61382 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Traf4Q61382 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.07■□□□□ 0.8
Traf4Q61382 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Traf4Q61382 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Traf4Q61382 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Traf4Q61382 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Traf4Q61382 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.05■□□□□ 0.8
Traf4Q61382 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Traf4Q61382 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Traf4Q61382 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Traf4Q61382 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.04■□□□□ 0.8
Traf4Q61382 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Traf4Q61382 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Traf4Q61382 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Traf4Q61382 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Traf4Q61382 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.03■□□□□ 0.8
Traf4Q61382 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Traf4Q61382 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.03■□□□□ 0.8
Traf4Q61382 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Traf4Q61382 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Traf4Q61382 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Traf4Q61382 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Traf4Q61382 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Traf4Q61382 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Traf4Q61382 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Traf4Q61382 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Traf4Q61382 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Traf4Q61382 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.01■□□□□ 0.79
Traf4Q61382 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Traf4Q61382 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Traf4Q61382 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Traf4Q61382 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Traf4Q61382 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Traf4Q61382 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Traf4Q61382 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.98■□□□□ 0.79
Traf4Q61382 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Traf4Q61382 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Traf4Q61382 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Traf4Q61382 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.98■□□□□ 0.79
Traf4Q61382 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Traf4Q61382 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Traf4Q61382 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Traf4Q61382 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Traf4Q61382 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Traf4Q61382 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Traf4Q61382 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Traf4Q61382 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Traf4Q61382 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Traf4Q61382 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Traf4Q61382 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Traf4Q61382 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Traf4Q61382 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Traf4Q61382 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Traf4Q61382 Cap2-205ENSMUST00000225824 1634 ntBASIC19.94■□□□□ 0.78
Traf4Q61382 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.94■□□□□ 0.78
Traf4Q61382 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Traf4Q61382 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.94■□□□□ 0.78
Traf4Q61382 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Traf4Q61382 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Traf4Q61382 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Traf4Q61382 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms