Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Rnf20Q5DTM8 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.35■■□□□ 1.97
Rnf20Q5DTM8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rnf20Q5DTM8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf20Q5DTM8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf20Q5DTM8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Rnf20Q5DTM8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rnf20Q5DTM8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Rnf20Q5DTM8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rnf20Q5DTM8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rnf20Q5DTM8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Rnf20Q5DTM8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rnf20Q5DTM8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Rnf20Q5DTM8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rnf20Q5DTM8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rnf20Q5DTM8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rnf20Q5DTM8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rnf20Q5DTM8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Rnf20Q5DTM8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.28■■□□□ 1.96
Rnf20Q5DTM8 Gm7432-201ENSMUST00000210343 879 ntBASIC27.27■■□□□ 1.96
Rnf20Q5DTM8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rnf20Q5DTM8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rnf20Q5DTM8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Rnf20Q5DTM8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rnf20Q5DTM8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Rnf20Q5DTM8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Rnf20Q5DTM8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rnf20Q5DTM8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rnf20Q5DTM8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.23■■□□□ 1.95
Rnf20Q5DTM8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Rnf20Q5DTM8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Rnf20Q5DTM8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rnf20Q5DTM8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Rnf20Q5DTM8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.22■■□□□ 1.95
Rnf20Q5DTM8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rnf20Q5DTM8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rnf20Q5DTM8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rnf20Q5DTM8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rnf20Q5DTM8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Rnf20Q5DTM8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.21■■□□□ 1.95
Rnf20Q5DTM8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Rnf20Q5DTM8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Rnf20Q5DTM8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
Rnf20Q5DTM8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rnf20Q5DTM8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Rnf20Q5DTM8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rnf20Q5DTM8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rnf20Q5DTM8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rnf20Q5DTM8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rnf20Q5DTM8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.16■■□□□ 1.94
Rnf20Q5DTM8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Rnf20Q5DTM8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Rnf20Q5DTM8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rnf20Q5DTM8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Rnf20Q5DTM8 Gm11599-201ENSMUST00000118720 878 ntBASIC27.15■■□□□ 1.94
Rnf20Q5DTM8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rnf20Q5DTM8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rnf20Q5DTM8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rnf20Q5DTM8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rnf20Q5DTM8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Rnf20Q5DTM8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.13■■□□□ 1.93
Rnf20Q5DTM8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rnf20Q5DTM8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rnf20Q5DTM8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 Gm4799-201ENSMUST00000095396 657 ntBASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Rnf20Q5DTM8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rnf20Q5DTM8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.1■■□□□ 1.93
Rnf20Q5DTM8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rnf20Q5DTM8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rnf20Q5DTM8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rnf20Q5DTM8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.09■■□□□ 1.93
Rnf20Q5DTM8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.09■■□□□ 1.93
Rnf20Q5DTM8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rnf20Q5DTM8 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.09■■□□□ 1.93
Rnf20Q5DTM8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rnf20Q5DTM8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rnf20Q5DTM8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rnf20Q5DTM8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rnf20Q5DTM8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
Rnf20Q5DTM8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rnf20Q5DTM8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.07■■□□□ 1.92
Rnf20Q5DTM8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Rnf20Q5DTM8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Rnf20Q5DTM8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf20Q5DTM8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf20Q5DTM8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf20Q5DTM8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf20Q5DTM8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Rnf20Q5DTM8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms