Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.91■■□□□ 1.9
Rc3h1Q4VGL6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.9■■□□□ 1.9
Rc3h1Q4VGL6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Rc3h1Q4VGL6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rc3h1Q4VGL6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rc3h1Q4VGL6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rc3h1Q4VGL6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Rc3h1Q4VGL6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Rc3h1Q4VGL6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC26.88■■□□□ 1.89
Rc3h1Q4VGL6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC26.88■■□□□ 1.89
Rc3h1Q4VGL6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Rc3h1Q4VGL6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Rc3h1Q4VGL6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.87■■□□□ 1.89
Rc3h1Q4VGL6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rc3h1Q4VGL6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Rc3h1Q4VGL6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rc3h1Q4VGL6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rc3h1Q4VGL6 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.85■■□□□ 1.89
Rc3h1Q4VGL6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rc3h1Q4VGL6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rc3h1Q4VGL6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rc3h1Q4VGL6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Rc3h1Q4VGL6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rc3h1Q4VGL6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rc3h1Q4VGL6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.82■■□□□ 1.88
Rc3h1Q4VGL6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Rc3h1Q4VGL6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Rc3h1Q4VGL6 Gm27502-201ENSMUST00000183495 199 ntBASIC26.81■■□□□ 1.88
Rc3h1Q4VGL6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Rc3h1Q4VGL6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rc3h1Q4VGL6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rc3h1Q4VGL6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Gm12366-201ENSMUST00000121722 873 ntBASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Gm5786-201ENSMUST00000085368 882 ntBASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rc3h1Q4VGL6 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.78■■□□□ 1.88
Rc3h1Q4VGL6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Rc3h1Q4VGL6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rc3h1Q4VGL6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rc3h1Q4VGL6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Rc3h1Q4VGL6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.77■■□□□ 1.88
Rc3h1Q4VGL6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rc3h1Q4VGL6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rc3h1Q4VGL6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rc3h1Q4VGL6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Rc3h1Q4VGL6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rc3h1Q4VGL6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rc3h1Q4VGL6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Rc3h1Q4VGL6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rc3h1Q4VGL6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Rc3h1Q4VGL6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rc3h1Q4VGL6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Rc3h1Q4VGL6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.75■■□□□ 1.87
Rc3h1Q4VGL6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rc3h1Q4VGL6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.74■■□□□ 1.87
Rc3h1Q4VGL6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rc3h1Q4VGL6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Rc3h1Q4VGL6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.73■■□□□ 1.87
Rc3h1Q4VGL6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.72■■□□□ 1.87
Rc3h1Q4VGL6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rc3h1Q4VGL6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rc3h1Q4VGL6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Rc3h1Q4VGL6 Terc-201ENSMUST00000082862 423 ntBASIC26.71■■□□□ 1.87
Rc3h1Q4VGL6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rc3h1Q4VGL6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.71■■□□□ 1.87
Rc3h1Q4VGL6 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.71■■□□□ 1.87
Rc3h1Q4VGL6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Rc3h1Q4VGL6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rc3h1Q4VGL6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC26.7■■□□□ 1.86
Rc3h1Q4VGL6 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.7■■□□□ 1.86
Rc3h1Q4VGL6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Rc3h1Q4VGL6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rc3h1Q4VGL6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Rc3h1Q4VGL6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Rc3h1Q4VGL6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Rc3h1Q4VGL6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rc3h1Q4VGL6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Rc3h1Q4VGL6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rc3h1Q4VGL6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rc3h1Q4VGL6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rc3h1Q4VGL6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rc3h1Q4VGL6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rc3h1Q4VGL6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.66■■□□□ 1.86
Rc3h1Q4VGL6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rc3h1Q4VGL6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rc3h1Q4VGL6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Rc3h1Q4VGL6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rc3h1Q4VGL6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rc3h1Q4VGL6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.64■■□□□ 1.86
Rc3h1Q4VGL6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms