Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
R3hdm4Q4VBF2 Mir3960-201ENSMUST00000198213 73 ntBASIC24.95■■□□□ 1.58
R3hdm4Q4VBF2 Gm45364-201ENSMUST00000210883 159 ntBASIC24.95■■□□□ 1.58
R3hdm4Q4VBF2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.95■■□□□ 1.58
R3hdm4Q4VBF2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
R3hdm4Q4VBF2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
R3hdm4Q4VBF2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
R3hdm4Q4VBF2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
R3hdm4Q4VBF2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
R3hdm4Q4VBF2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
R3hdm4Q4VBF2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
R3hdm4Q4VBF2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
R3hdm4Q4VBF2 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.93■■□□□ 1.58
R3hdm4Q4VBF2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
R3hdm4Q4VBF2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.92■■□□□ 1.58
R3hdm4Q4VBF2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
R3hdm4Q4VBF2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
R3hdm4Q4VBF2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
R3hdm4Q4VBF2 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.91■■□□□ 1.58
R3hdm4Q4VBF2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.91■■□□□ 1.58
R3hdm4Q4VBF2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
R3hdm4Q4VBF2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
R3hdm4Q4VBF2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
R3hdm4Q4VBF2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
R3hdm4Q4VBF2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Gm6311-201ENSMUST00000073790 878 ntBASIC24.89■■□□□ 1.58
R3hdm4Q4VBF2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
R3hdm4Q4VBF2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
R3hdm4Q4VBF2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
R3hdm4Q4VBF2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.88■■□□□ 1.57
R3hdm4Q4VBF2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
R3hdm4Q4VBF2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
R3hdm4Q4VBF2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
R3hdm4Q4VBF2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
R3hdm4Q4VBF2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
R3hdm4Q4VBF2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
R3hdm4Q4VBF2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
R3hdm4Q4VBF2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
R3hdm4Q4VBF2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.84■■□□□ 1.57
R3hdm4Q4VBF2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
R3hdm4Q4VBF2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
R3hdm4Q4VBF2 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.84■■□□□ 1.57
R3hdm4Q4VBF2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
R3hdm4Q4VBF2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
R3hdm4Q4VBF2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.83■■□□□ 1.57
R3hdm4Q4VBF2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
R3hdm4Q4VBF2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
R3hdm4Q4VBF2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
R3hdm4Q4VBF2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
R3hdm4Q4VBF2 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.82■■□□□ 1.56
R3hdm4Q4VBF2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
R3hdm4Q4VBF2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.81■■□□□ 1.56
R3hdm4Q4VBF2 Gm9812-201ENSMUST00000061934 968 ntBASIC24.81■■□□□ 1.56
R3hdm4Q4VBF2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
R3hdm4Q4VBF2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
R3hdm4Q4VBF2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
R3hdm4Q4VBF2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
R3hdm4Q4VBF2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
R3hdm4Q4VBF2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
R3hdm4Q4VBF2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.78■■□□□ 1.56
R3hdm4Q4VBF2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
R3hdm4Q4VBF2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
R3hdm4Q4VBF2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.77■■□□□ 1.56
R3hdm4Q4VBF2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
R3hdm4Q4VBF2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
R3hdm4Q4VBF2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.76■■□□□ 1.55
R3hdm4Q4VBF2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.76■■□□□ 1.55
R3hdm4Q4VBF2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
R3hdm4Q4VBF2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
R3hdm4Q4VBF2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
R3hdm4Q4VBF2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.73■■□□□ 1.55
R3hdm4Q4VBF2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
R3hdm4Q4VBF2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
R3hdm4Q4VBF2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
R3hdm4Q4VBF2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
R3hdm4Q4VBF2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
R3hdm4Q4VBF2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
R3hdm4Q4VBF2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
R3hdm4Q4VBF2 Gm11175-201ENSMUST00000116172 543 ntBASIC24.72■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms