Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Lsmem1Q3UQS2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.49■■□□□ 1.35
Lsmem1Q3UQS2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Lsmem1Q3UQS2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Lsmem1Q3UQS2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsmem1Q3UQS2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsmem1Q3UQS2 Mir3960-201ENSMUST00000198213 73 ntBASIC23.47■■□□□ 1.35
Lsmem1Q3UQS2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Lsmem1Q3UQS2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Lsmem1Q3UQS2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.46■■□□□ 1.35
Lsmem1Q3UQS2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.46■■□□□ 1.35
Lsmem1Q3UQS2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lsmem1Q3UQS2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Lsmem1Q3UQS2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Lsmem1Q3UQS2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lsmem1Q3UQS2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.44■■□□□ 1.34
Lsmem1Q3UQS2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Lsmem1Q3UQS2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Lsmem1Q3UQS2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.43■■□□□ 1.34
Lsmem1Q3UQS2 Gm45364-201ENSMUST00000210883 159 ntBASIC23.43■■□□□ 1.34
Lsmem1Q3UQS2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsmem1Q3UQS2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Lsmem1Q3UQS2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lsmem1Q3UQS2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lsmem1Q3UQS2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Lsmem1Q3UQS2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lsmem1Q3UQS2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Lsmem1Q3UQS2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.42■■□□□ 1.34
Lsmem1Q3UQS2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Lsmem1Q3UQS2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lsmem1Q3UQS2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Lsmem1Q3UQS2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Lsmem1Q3UQS2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Lsmem1Q3UQS2 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.4■■□□□ 1.34
Lsmem1Q3UQS2 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.4■■□□□ 1.34
Lsmem1Q3UQS2 Gm9812-201ENSMUST00000061934 968 ntBASIC23.4■■□□□ 1.34
Lsmem1Q3UQS2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Lsmem1Q3UQS2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Lsmem1Q3UQS2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Lsmem1Q3UQS2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Lsmem1Q3UQS2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Lsmem1Q3UQS2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Lsmem1Q3UQS2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Lsmem1Q3UQS2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lsmem1Q3UQS2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Lsmem1Q3UQS2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.38■■□□□ 1.33
Lsmem1Q3UQS2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Lsmem1Q3UQS2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Lsmem1Q3UQS2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.37■■□□□ 1.33
Lsmem1Q3UQS2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Lsmem1Q3UQS2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lsmem1Q3UQS2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.36■■□□□ 1.33
Lsmem1Q3UQS2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lsmem1Q3UQS2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lsmem1Q3UQS2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Lsmem1Q3UQS2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Lsmem1Q3UQS2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Lsmem1Q3UQS2 Gm6311-201ENSMUST00000073790 878 ntBASIC23.34■■□□□ 1.33
Lsmem1Q3UQS2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.33■■□□□ 1.33
Lsmem1Q3UQS2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Lsmem1Q3UQS2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Lsmem1Q3UQS2 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.32■■□□□ 1.32
Lsmem1Q3UQS2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Lsmem1Q3UQS2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lsmem1Q3UQS2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lsmem1Q3UQS2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.31■■□□□ 1.32
Lsmem1Q3UQS2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
Lsmem1Q3UQS2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lsmem1Q3UQS2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Lsmem1Q3UQS2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.3■■□□□ 1.32
Lsmem1Q3UQS2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lsmem1Q3UQS2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.3■■□□□ 1.32
Lsmem1Q3UQS2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Lsmem1Q3UQS2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Lsmem1Q3UQS2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Lsmem1Q3UQS2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Lsmem1Q3UQS2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Lsmem1Q3UQS2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Lsmem1Q3UQS2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lsmem1Q3UQS2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.27■■□□□ 1.32
Lsmem1Q3UQS2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Lsmem1Q3UQS2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Lsmem1Q3UQS2 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.25■■□□□ 1.31
Lsmem1Q3UQS2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Lsmem1Q3UQS2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lsmem1Q3UQS2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lsmem1Q3UQS2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Lsmem1Q3UQS2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms