Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.12■■■□□ 2.41
Uspl1Q3ULM6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Uspl1Q3ULM6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Uspl1Q3ULM6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Uspl1Q3ULM6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Uspl1Q3ULM6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Uspl1Q3ULM6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Uspl1Q3ULM6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Uspl1Q3ULM6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Uspl1Q3ULM6 Gm45364-201ENSMUST00000210883 159 ntBASIC30.07■■■□□ 2.4
Uspl1Q3ULM6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Uspl1Q3ULM6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Uspl1Q3ULM6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Uspl1Q3ULM6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC30.06■■■□□ 2.4
Uspl1Q3ULM6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Uspl1Q3ULM6 Mir3960-201ENSMUST00000198213 73 ntBASIC30.06■■■□□ 2.4
Uspl1Q3ULM6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.06■■■□□ 2.4
Uspl1Q3ULM6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Uspl1Q3ULM6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Uspl1Q3ULM6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Uspl1Q3ULM6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Uspl1Q3ULM6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Uspl1Q3ULM6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.04■■■□□ 2.4
Uspl1Q3ULM6 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.04■■■□□ 2.4
Uspl1Q3ULM6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.04■■■□□ 2.4
Uspl1Q3ULM6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Uspl1Q3ULM6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Uspl1Q3ULM6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Uspl1Q3ULM6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Uspl1Q3ULM6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Uspl1Q3ULM6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Uspl1Q3ULM6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Uspl1Q3ULM6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Uspl1Q3ULM6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
Uspl1Q3ULM6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Uspl1Q3ULM6 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.01■■■□□ 2.4
Uspl1Q3ULM6 Gm9812-201ENSMUST00000061934 968 ntBASIC30.01■■■□□ 2.39
Uspl1Q3ULM6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Uspl1Q3ULM6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Uspl1Q3ULM6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30■■■□□ 2.39
Uspl1Q3ULM6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
Uspl1Q3ULM6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Uspl1Q3ULM6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.99■■■□□ 2.39
Uspl1Q3ULM6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Uspl1Q3ULM6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Uspl1Q3ULM6 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.98■■■□□ 2.39
Uspl1Q3ULM6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.98■■■□□ 2.39
Uspl1Q3ULM6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Uspl1Q3ULM6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Uspl1Q3ULM6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Uspl1Q3ULM6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Uspl1Q3ULM6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Uspl1Q3ULM6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Uspl1Q3ULM6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC29.96■■■□□ 2.39
Uspl1Q3ULM6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC29.96■■■□□ 2.39
Uspl1Q3ULM6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Uspl1Q3ULM6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC29.95■■■□□ 2.39
Uspl1Q3ULM6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC29.95■■■□□ 2.39
Uspl1Q3ULM6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Uspl1Q3ULM6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Uspl1Q3ULM6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.94■■■□□ 2.38
Uspl1Q3ULM6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Uspl1Q3ULM6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Uspl1Q3ULM6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Uspl1Q3ULM6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.91■■■□□ 2.38
Uspl1Q3ULM6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Uspl1Q3ULM6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Uspl1Q3ULM6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.9■■■□□ 2.38
Uspl1Q3ULM6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Uspl1Q3ULM6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
Uspl1Q3ULM6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Uspl1Q3ULM6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Uspl1Q3ULM6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.88■■■□□ 2.37
Uspl1Q3ULM6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.88■■■□□ 2.37
Uspl1Q3ULM6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC29.86■■■□□ 2.37
Uspl1Q3ULM6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Uspl1Q3ULM6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Uspl1Q3ULM6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Uspl1Q3ULM6 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.85■■■□□ 2.37
Uspl1Q3ULM6 Gm6311-201ENSMUST00000073790 878 ntBASIC29.85■■■□□ 2.37
Uspl1Q3ULM6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Uspl1Q3ULM6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Uspl1Q3ULM6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Uspl1Q3ULM6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Uspl1Q3ULM6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Uspl1Q3ULM6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Uspl1Q3ULM6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Uspl1Q3ULM6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Uspl1Q3ULM6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Uspl1Q3ULM6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Uspl1Q3ULM6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Uspl1Q3ULM6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Uspl1Q3ULM6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms