Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Lrrk1Q3UHC2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.58■■□□□ 1.04
Lrrk1Q3UHC2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrk1Q3UHC2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrk1Q3UHC2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Lrrk1Q3UHC2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.56■■□□□ 1.04
Lrrk1Q3UHC2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrk1Q3UHC2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lrrk1Q3UHC2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Lrrk1Q3UHC2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.55■■□□□ 1.04
Lrrk1Q3UHC2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.55■■□□□ 1.04
Lrrk1Q3UHC2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.55■■□□□ 1.04
Lrrk1Q3UHC2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.55■■□□□ 1.04
Lrrk1Q3UHC2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrk1Q3UHC2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrk1Q3UHC2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrk1Q3UHC2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.54■■□□□ 1.04
Lrrk1Q3UHC2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lrrk1Q3UHC2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Lrrk1Q3UHC2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lrrk1Q3UHC2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.52■■□□□ 1.04
Lrrk1Q3UHC2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.52■■□□□ 1.04
Lrrk1Q3UHC2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lrrk1Q3UHC2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Lrrk1Q3UHC2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Lrrk1Q3UHC2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrk1Q3UHC2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lrrk1Q3UHC2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrk1Q3UHC2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lrrk1Q3UHC2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Lrrk1Q3UHC2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrk1Q3UHC2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Lrrk1Q3UHC2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrk1Q3UHC2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.49■■□□□ 1.03
Lrrk1Q3UHC2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lrrk1Q3UHC2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrk1Q3UHC2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrk1Q3UHC2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lrrk1Q3UHC2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.47■■□□□ 1.03
Lrrk1Q3UHC2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.46■■□□□ 1.03
Lrrk1Q3UHC2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lrrk1Q3UHC2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Lrrk1Q3UHC2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrk1Q3UHC2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.45■■□□□ 1.02
Lrrk1Q3UHC2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Lrrk1Q3UHC2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrk1Q3UHC2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrk1Q3UHC2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lrrk1Q3UHC2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrk1Q3UHC2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lrrk1Q3UHC2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lrrk1Q3UHC2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrk1Q3UHC2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lrrk1Q3UHC2 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.43■■□□□ 1.02
Lrrk1Q3UHC2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrk1Q3UHC2 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.42■■□□□ 1.02
Lrrk1Q3UHC2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrk1Q3UHC2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrk1Q3UHC2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrk1Q3UHC2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrk1Q3UHC2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrk1Q3UHC2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.41■■□□□ 1.02
Lrrk1Q3UHC2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrk1Q3UHC2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrk1Q3UHC2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrk1Q3UHC2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Lrrk1Q3UHC2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.39■■□□□ 1.02
Lrrk1Q3UHC2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Lrrk1Q3UHC2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrk1Q3UHC2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrk1Q3UHC2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.38■■□□□ 1.01
Lrrk1Q3UHC2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrk1Q3UHC2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Lrrk1Q3UHC2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Lrrk1Q3UHC2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrk1Q3UHC2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Lrrk1Q3UHC2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrk1Q3UHC2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrk1Q3UHC2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Lrrk1Q3UHC2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrk1Q3UHC2 Gm9812-201ENSMUST00000061934 968 ntBASIC21.36■■□□□ 1.01
Lrrk1Q3UHC2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrk1Q3UHC2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrk1Q3UHC2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrk1Q3UHC2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrk1Q3UHC2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrk1Q3UHC2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrk1Q3UHC2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrk1Q3UHC2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrk1Q3UHC2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrk1Q3UHC2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrk1Q3UHC2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrk1Q3UHC2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrk1Q3UHC2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 183.9 ms