Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.31■■■□□ 2.12
Col5a2Q3U962 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.31■■■□□ 2.12
Col5a2Q3U962 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.31■■■□□ 2.12
Col5a2Q3U962 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.3■■■□□ 2.12
Col5a2Q3U962 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Col5a2Q3U962 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Col5a2Q3U962 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28.29■■■□□ 2.12
Col5a2Q3U962 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Col5a2Q3U962 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Col5a2Q3U962 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Col5a2Q3U962 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.27■■■□□ 2.12
Col5a2Q3U962 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Col5a2Q3U962 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC28.26■■■□□ 2.11
Col5a2Q3U962 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Col5a2Q3U962 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Col5a2Q3U962 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Col5a2Q3U962 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Col5a2Q3U962 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Col5a2Q3U962 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.24■■■□□ 2.11
Col5a2Q3U962 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col5a2Q3U962 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Col5a2Q3U962 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Col5a2Q3U962 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Col5a2Q3U962 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Col5a2Q3U962 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Col5a2Q3U962 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Col5a2Q3U962 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Col5a2Q3U962 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Col5a2Q3U962 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
Col5a2Q3U962 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC28.2■■■□□ 2.1
Col5a2Q3U962 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Col5a2Q3U962 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.18■■■□□ 2.1
Col5a2Q3U962 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Col5a2Q3U962 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Col5a2Q3U962 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC28.17■■■□□ 2.1
Col5a2Q3U962 Gm43566-201ENSMUST00000196851 808 ntBASIC28.16■■■□□ 2.1
Col5a2Q3U962 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Col5a2Q3U962 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.16■■■□□ 2.1
Col5a2Q3U962 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.16■■■□□ 2.1
Col5a2Q3U962 Terc-201ENSMUST00000082862 423 ntBASIC28.15■■■□□ 2.1
Col5a2Q3U962 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Col5a2Q3U962 Gm13238-201ENSMUST00000117655 780 ntBASIC28.14■■■□□ 2.09
Col5a2Q3U962 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Col5a2Q3U962 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.14■■■□□ 2.09
Col5a2Q3U962 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC28.14■■■□□ 2.09
Col5a2Q3U962 Zxda-201ENSMUST00000117281 2621 ntBASIC28.13■■■□□ 2.09
Col5a2Q3U962 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
Col5a2Q3U962 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col5a2Q3U962 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.13■■■□□ 2.09
Col5a2Q3U962 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Col5a2Q3U962 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col5a2Q3U962 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col5a2Q3U962 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Col5a2Q3U962 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.11■■■□□ 2.09
Col5a2Q3U962 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.11■■■□□ 2.09
Col5a2Q3U962 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col5a2Q3U962 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col5a2Q3U962 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col5a2Q3U962 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.1■■■□□ 2.09
Col5a2Q3U962 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Col5a2Q3U962 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.09■■■□□ 2.09
Col5a2Q3U962 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col5a2Q3U962 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Col5a2Q3U962 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
Col5a2Q3U962 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.07■■■□□ 2.08
Col5a2Q3U962 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col5a2Q3U962 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Col5a2Q3U962 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
Col5a2Q3U962 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col5a2Q3U962 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Col5a2Q3U962 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col5a2Q3U962 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col5a2Q3U962 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col5a2Q3U962 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.04■■■□□ 2.08
Col5a2Q3U962 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Col5a2Q3U962 Rps24-207ENSMUST00000224568 714 ntBASIC28.04■■■□□ 2.08
Col5a2Q3U962 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col5a2Q3U962 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col5a2Q3U962 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col5a2Q3U962 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.03■■■□□ 2.08
Col5a2Q3U962 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
Col5a2Q3U962 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Col5a2Q3U962 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Col5a2Q3U962 Gm45102-201ENSMUST00000207427 857 ntBASIC28.02■■■□□ 2.08
Col5a2Q3U962 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Col5a2Q3U962 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col5a2Q3U962 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col5a2Q3U962 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Col5a2Q3U962 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Col5a2Q3U962 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.01■■■□□ 2.07
Col5a2Q3U962 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28■■■□□ 2.07
Col5a2Q3U962 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.99■■■□□ 2.07
Col5a2Q3U962 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.99■■■□□ 2.07
Col5a2Q3U962 Gm45444-201ENSMUST00000211394 898 ntBASIC27.99■■■□□ 2.07
Col5a2Q3U962 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col5a2Q3U962 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC27.98■■■□□ 2.07
Col5a2Q3U962 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
Col5a2Q3U962 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Col5a2Q3U962 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Col5a2Q3U962 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms