Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cln6Q3U466 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln6Q3U466 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cln6Q3U466 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cln6Q3U466 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cln6Q3U466 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln6Q3U466 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cln6Q3U466 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln6Q3U466 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cln6Q3U466 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cln6Q3U466 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln6Q3U466 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cln6Q3U466 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cln6Q3U466 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln6Q3U466 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cln6Q3U466 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cln6Q3U466 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cln6Q3U466 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cln6Q3U466 Gm30023-201ENSMUST00000197970 889 ntBASIC19.39■□□□□ 0.69
Cln6Q3U466 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cln6Q3U466 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cln6Q3U466 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.38■□□□□ 0.69
Cln6Q3U466 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cln6Q3U466 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.38■□□□□ 0.69
Cln6Q3U466 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.38■□□□□ 0.69
Cln6Q3U466 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.38■□□□□ 0.69
Cln6Q3U466 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cln6Q3U466 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Cln6Q3U466 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cln6Q3U466 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln6Q3U466 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cln6Q3U466 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cln6Q3U466 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cln6Q3U466 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cln6Q3U466 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln6Q3U466 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.35■□□□□ 0.69
Cln6Q3U466 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln6Q3U466 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cln6Q3U466 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cln6Q3U466 Particl-201ENSMUST00000205370 1560 ntBASIC19.35■□□□□ 0.69
Cln6Q3U466 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cln6Q3U466 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cln6Q3U466 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cln6Q3U466 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cln6Q3U466 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cln6Q3U466 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cln6Q3U466 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln6Q3U466 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln6Q3U466 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln6Q3U466 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln6Q3U466 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cln6Q3U466 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln6Q3U466 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cln6Q3U466 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln6Q3U466 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln6Q3U466 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln6Q3U466 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cln6Q3U466 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln6Q3U466 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cln6Q3U466 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cln6Q3U466 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln6Q3U466 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cln6Q3U466 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln6Q3U466 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Cln6Q3U466 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cln6Q3U466 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln6Q3U466 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cln6Q3U466 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln6Q3U466 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln6Q3U466 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cln6Q3U466 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln6Q3U466 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln6Q3U466 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cln6Q3U466 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Cln6Q3U466 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cln6Q3U466 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.28■□□□□ 0.68
Cln6Q3U466 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cln6Q3U466 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cln6Q3U466 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cln6Q3U466 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cln6Q3U466 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cln6Q3U466 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cln6Q3U466 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cln6Q3U466 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln6Q3U466 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cln6Q3U466 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.25■□□□□ 0.67
Cln6Q3U466 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cln6Q3U466 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cln6Q3U466 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cln6Q3U466 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms