Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pkd1l3Q2EG98 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pkd1l3Q2EG98 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pkd1l3Q2EG98 Gm9812-201ENSMUST00000061934 968 ntBASIC20.74■□□□□ 0.91
Pkd1l3Q2EG98 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.74■□□□□ 0.91
Pkd1l3Q2EG98 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pkd1l3Q2EG98 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pkd1l3Q2EG98 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.74■□□□□ 0.91
Pkd1l3Q2EG98 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pkd1l3Q2EG98 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l3Q2EG98 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l3Q2EG98 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l3Q2EG98 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l3Q2EG98 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l3Q2EG98 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pkd1l3Q2EG98 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pkd1l3Q2EG98 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pkd1l3Q2EG98 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pkd1l3Q2EG98 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.72■□□□□ 0.91
Pkd1l3Q2EG98 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pkd1l3Q2EG98 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pkd1l3Q2EG98 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.71■□□□□ 0.91
Pkd1l3Q2EG98 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pkd1l3Q2EG98 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pkd1l3Q2EG98 Gm27502-201ENSMUST00000183495 199 ntBASIC20.7■□□□□ 0.9
Pkd1l3Q2EG98 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.7■□□□□ 0.9
Pkd1l3Q2EG98 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkd1l3Q2EG98 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.7■□□□□ 0.9
Pkd1l3Q2EG98 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pkd1l3Q2EG98 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pkd1l3Q2EG98 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkd1l3Q2EG98 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pkd1l3Q2EG98 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pkd1l3Q2EG98 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pkd1l3Q2EG98 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkd1l3Q2EG98 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.68■□□□□ 0.9
Pkd1l3Q2EG98 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pkd1l3Q2EG98 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.68■□□□□ 0.9
Pkd1l3Q2EG98 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
Pkd1l3Q2EG98 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pkd1l3Q2EG98 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pkd1l3Q2EG98 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pkd1l3Q2EG98 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pkd1l3Q2EG98 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkd1l3Q2EG98 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pkd1l3Q2EG98 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.66■□□□□ 0.9
Pkd1l3Q2EG98 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pkd1l3Q2EG98 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pkd1l3Q2EG98 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pkd1l3Q2EG98 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pkd1l3Q2EG98 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pkd1l3Q2EG98 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.65■□□□□ 0.9
Pkd1l3Q2EG98 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Pkd1l3Q2EG98 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pkd1l3Q2EG98 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pkd1l3Q2EG98 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pkd1l3Q2EG98 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pkd1l3Q2EG98 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pkd1l3Q2EG98 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Terc-201ENSMUST00000082862 423 ntBASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pkd1l3Q2EG98 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pkd1l3Q2EG98 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pkd1l3Q2EG98 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pkd1l3Q2EG98 Gm14523-201ENSMUST00000117260 558 ntBASIC20.61■□□□□ 0.89
Pkd1l3Q2EG98 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pkd1l3Q2EG98 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pkd1l3Q2EG98 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l3Q2EG98 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l3Q2EG98 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l3Q2EG98 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l3Q2EG98 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l3Q2EG98 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pkd1l3Q2EG98 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.59■□□□□ 0.89
Pkd1l3Q2EG98 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pkd1l3Q2EG98 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pkd1l3Q2EG98 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pkd1l3Q2EG98 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pkd1l3Q2EG98 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pkd1l3Q2EG98 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pkd1l3Q2EG98 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.57■□□□□ 0.88
Pkd1l3Q2EG98 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pkd1l3Q2EG98 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkd1l3Q2EG98 Gm10420-201ENSMUST00000121713 882 ntBASIC20.57■□□□□ 0.88
Pkd1l3Q2EG98 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkd1l3Q2EG98 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkd1l3Q2EG98 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Pkd1l3Q2EG98 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 246.2 ms