Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smn1P97801 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smn1P97801 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smn1P97801 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smn1P97801 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smn1P97801 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smn1P97801 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smn1P97801 Gm9397-201ENSMUST00000200125 605 ntBASIC19.61■□□□□ 0.73
Smn1P97801 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Smn1P97801 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smn1P97801 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Smn1P97801 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smn1P97801 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smn1P97801 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smn1P97801 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smn1P97801 Gm24970-201ENSMUST00000175582 82 ntBASIC19.6■□□□□ 0.73
Smn1P97801 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smn1P97801 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smn1P97801 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smn1P97801 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smn1P97801 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smn1P97801 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smn1P97801 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smn1P97801 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smn1P97801 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Smn1P97801 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smn1P97801 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smn1P97801 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smn1P97801 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smn1P97801 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smn1P97801 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smn1P97801 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smn1P97801 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.56■□□□□ 0.72
Smn1P97801 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smn1P97801 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smn1P97801 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smn1P97801 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Smn1P97801 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smn1P97801 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Smn1P97801 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smn1P97801 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smn1P97801 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smn1P97801 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smn1P97801 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smn1P97801 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Smn1P97801 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Smn1P97801 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smn1P97801 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Smn1P97801 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smn1P97801 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smn1P97801 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smn1P97801 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smn1P97801 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smn1P97801 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.51■□□□□ 0.71
Smn1P97801 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smn1P97801 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smn1P97801 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smn1P97801 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smn1P97801 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.5■□□□□ 0.71
Smn1P97801 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smn1P97801 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smn1P97801 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smn1P97801 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smn1P97801 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smn1P97801 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smn1P97801 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.49■□□□□ 0.71
Smn1P97801 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smn1P97801 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smn1P97801 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smn1P97801 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smn1P97801 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Smn1P97801 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smn1P97801 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smn1P97801 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smn1P97801 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smn1P97801 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smn1P97801 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smn1P97801 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.47■□□□□ 0.71
Smn1P97801 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smn1P97801 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smn1P97801 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smn1P97801 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smn1P97801 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smn1P97801 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.46■□□□□ 0.71
Smn1P97801 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smn1P97801 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smn1P97801 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smn1P97801 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smn1P97801 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.45■□□□□ 0.7
Smn1P97801 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smn1P97801 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smn1P97801 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smn1P97801 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smn1P97801 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms