Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.55■■□□□ 1.04
Cacna1aP97445 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1aP97445 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.54■■□□□ 1.04
Cacna1aP97445 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.54■■□□□ 1.04
Cacna1aP97445 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1aP97445 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cacna1aP97445 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Cacna1aP97445 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.53■■□□□ 1.04
Cacna1aP97445 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1aP97445 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cacna1aP97445 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.53■■□□□ 1.04
Cacna1aP97445 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cacna1aP97445 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1aP97445 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cacna1aP97445 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cacna1aP97445 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.51■■□□□ 1.03
Cacna1aP97445 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.51■■□□□ 1.03
Cacna1aP97445 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1aP97445 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1aP97445 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1aP97445 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.51■■□□□ 1.03
Cacna1aP97445 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cacna1aP97445 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Cacna1aP97445 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.5■■□□□ 1.03
Cacna1aP97445 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1aP97445 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1aP97445 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cacna1aP97445 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1aP97445 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1aP97445 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cacna1aP97445 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Cacna1aP97445 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.49■■□□□ 1.03
Cacna1aP97445 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.49■■□□□ 1.03
Cacna1aP97445 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cacna1aP97445 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1aP97445 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1aP97445 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cacna1aP97445 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Cacna1aP97445 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Cacna1aP97445 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1aP97445 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.46■■□□□ 1.03
Cacna1aP97445 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1aP97445 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cacna1aP97445 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Cacna1aP97445 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Cacna1aP97445 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cacna1aP97445 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cacna1aP97445 Rps24-207ENSMUST00000224568 714 ntBASIC21.44■■□□□ 1.02
Cacna1aP97445 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.44■■□□□ 1.02
Cacna1aP97445 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cacna1aP97445 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1aP97445 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cacna1aP97445 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.43■■□□□ 1.02
Cacna1aP97445 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.43■■□□□ 1.02
Cacna1aP97445 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacna1aP97445 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Cacna1aP97445 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cacna1aP97445 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Cacna1aP97445 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Cacna1aP97445 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1aP97445 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1aP97445 Gm15820-201ENSMUST00000201566 728 ntBASIC21.4■■□□□ 1.02
Cacna1aP97445 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1aP97445 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacna1aP97445 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.39■■□□□ 1.01
Cacna1aP97445 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacna1aP97445 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1aP97445 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1aP97445 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1aP97445 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.37■■□□□ 1.01
Cacna1aP97445 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cacna1aP97445 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.37■■□□□ 1.01
Cacna1aP97445 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacna1aP97445 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1aP97445 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1aP97445 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacna1aP97445 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.34■■□□□ 1.01
Cacna1aP97445 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.34■■□□□ 1.01
Cacna1aP97445 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cacna1aP97445 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.33■■□□□ 1.01
Cacna1aP97445 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cacna1aP97445 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cacna1aP97445 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacna1aP97445 Terc-201ENSMUST00000082862 423 ntBASIC21.32■■□□□ 1
Cacna1aP97445 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.32■■□□□ 1
Cacna1aP97445 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cacna1aP97445 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacna1aP97445 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.32■■□□□ 1
Cacna1aP97445 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cacna1aP97445 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cacna1aP97445 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1aP97445 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1aP97445 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cacna1aP97445 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.31■■□□□ 1
Cacna1aP97445 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cacna1aP97445 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Cacna1aP97445 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cacna1aP97445 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cacna1aP97445 Gm14117-201ENSMUST00000122417 843 ntBASIC21.3■■□□□ 1
Cacna1aP97445 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms