Protein–RNA interactions for Protein: P63013

Prrx1, Paired mesoderm homeobox protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrx1P63013 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prrx1P63013 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prrx1P63013 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prrx1P63013 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Prrx1P63013 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prrx1P63013 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prrx1P63013 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prrx1P63013 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prrx1P63013 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prrx1P63013 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prrx1P63013 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Prrx1P63013 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.82■□□□□ 0.6
Prrx1P63013 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Prrx1P63013 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prrx1P63013 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prrx1P63013 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Prrx1P63013 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.81■□□□□ 0.6
Prrx1P63013 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Prrx1P63013 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrx1P63013 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Prrx1P63013 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrx1P63013 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prrx1P63013 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrx1P63013 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prrx1P63013 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prrx1P63013 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prrx1P63013 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prrx1P63013 Gm4799-201ENSMUST00000095396 657 ntBASIC18.79■□□□□ 0.6
Prrx1P63013 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prrx1P63013 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prrx1P63013 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Prrx1P63013 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prrx1P63013 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.78■□□□□ 0.6
Prrx1P63013 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prrx1P63013 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prrx1P63013 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Prrx1P63013 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.77■□□□□ 0.6
Prrx1P63013 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Prrx1P63013 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prrx1P63013 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.76■□□□□ 0.59
Prrx1P63013 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prrx1P63013 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prrx1P63013 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prrx1P63013 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prrx1P63013 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prrx1P63013 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.76■□□□□ 0.59
Prrx1P63013 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.76■□□□□ 0.59
Prrx1P63013 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prrx1P63013 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.75■□□□□ 0.59
Prrx1P63013 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prrx1P63013 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prrx1P63013 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prrx1P63013 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prrx1P63013 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prrx1P63013 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Prrx1P63013 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.73■□□□□ 0.59
Prrx1P63013 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.72■□□□□ 0.59
Prrx1P63013 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prrx1P63013 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prrx1P63013 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Prrx1P63013 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prrx1P63013 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prrx1P63013 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Prrx1P63013 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prrx1P63013 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Prrx1P63013 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prrx1P63013 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Prrx1P63013 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prrx1P63013 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prrx1P63013 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.7■□□□□ 0.58
Prrx1P63013 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prrx1P63013 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Prrx1P63013 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrx1P63013 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrx1P63013 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prrx1P63013 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrx1P63013 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prrx1P63013 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Prrx1P63013 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prrx1P63013 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prrx1P63013 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Prrx1P63013 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Prrx1P63013 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prrx1P63013 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Prrx1P63013 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.68■□□□□ 0.58
Prrx1P63013 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Prrx1P63013 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrx1P63013 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Prrx1P63013 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Prrx1P63013 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Prrx1P63013 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Prrx1P63013 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prrx1P63013 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Prrx1P63013 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prrx1P63013 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Prrx1P63013 Mir3960-201ENSMUST00000198213 73 ntBASIC18.66■□□□□ 0.58
Prrx1P63013 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.66■□□□□ 0.58
Prrx1P63013 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Prrx1P63013 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.66■□□□□ 0.58
Prrx1P63013 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms