Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-2P42586 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-2P42586 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-2P42586 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-2P42586 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx2-2P42586 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-2P42586 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-2P42586 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx2-2P42586 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.17■□□□□ 0.98
Nkx2-2P42586 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-2P42586 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-2P42586 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Nkx2-2P42586 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx2-2P42586 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-2P42586 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-2P42586 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nkx2-2P42586 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.14■□□□□ 0.97
Nkx2-2P42586 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nkx2-2P42586 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-2P42586 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.13■□□□□ 0.97
Nkx2-2P42586 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-2P42586 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nkx2-2P42586 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-2P42586 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nkx2-2P42586 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-2P42586 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.12■□□□□ 0.97
Nkx2-2P42586 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-2P42586 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-2P42586 Gm4799-201ENSMUST00000095396 657 ntBASIC21.12■□□□□ 0.97
Nkx2-2P42586 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-2P42586 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nkx2-2P42586 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.11■□□□□ 0.97
Nkx2-2P42586 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-2P42586 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nkx2-2P42586 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-2P42586 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nkx2-2P42586 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nkx2-2P42586 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-2P42586 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-2P42586 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Nkx2-2P42586 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Nkx2-2P42586 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.09■□□□□ 0.97
Nkx2-2P42586 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.09■□□□□ 0.97
Nkx2-2P42586 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-2P42586 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-2P42586 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nkx2-2P42586 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-2P42586 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Nkx2-2P42586 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-2P42586 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-2P42586 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nkx2-2P42586 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nkx2-2P42586 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Nkx2-2P42586 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-2P42586 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nkx2-2P42586 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nkx2-2P42586 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-2P42586 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-2P42586 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.06■□□□□ 0.96
Nkx2-2P42586 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nkx2-2P42586 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-2P42586 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-2P42586 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-2P42586 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nkx2-2P42586 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.05■□□□□ 0.96
Nkx2-2P42586 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.04■□□□□ 0.96
Nkx2-2P42586 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nkx2-2P42586 Mir3960-201ENSMUST00000198213 73 ntBASIC21.03■□□□□ 0.96
Nkx2-2P42586 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nkx2-2P42586 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-2P42586 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-2P42586 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.02■□□□□ 0.96
Nkx2-2P42586 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-2P42586 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Nkx2-2P42586 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-2P42586 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Nkx2-2P42586 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-2P42586 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Nkx2-2P42586 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21■□□□□ 0.95
Nkx2-2P42586 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nkx2-2P42586 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-2P42586 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.99■□□□□ 0.95
Nkx2-2P42586 Gm9812-201ENSMUST00000061934 968 ntBASIC20.99■□□□□ 0.95
Nkx2-2P42586 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-2P42586 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.98■□□□□ 0.95
Nkx2-2P42586 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.97■□□□□ 0.95
Nkx2-2P42586 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-2P42586 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.96■□□□□ 0.95
Nkx2-2P42586 Gm45364-201ENSMUST00000210883 159 ntBASIC20.96■□□□□ 0.95
Nkx2-2P42586 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.95■□□□□ 0.95
Nkx2-2P42586 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-2P42586 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms