Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn1aP39689 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn1aP39689 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn1aP39689 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.02■□□□□ 0.64
Cdkn1aP39689 Cap2-205ENSMUST00000225824 1634 ntBASIC19.02■□□□□ 0.64
Cdkn1aP39689 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cdkn1aP39689 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdkn1aP39689 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdkn1aP39689 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cdkn1aP39689 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn1aP39689 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn1aP39689 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn1aP39689 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdkn1aP39689 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn1aP39689 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdkn1aP39689 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cdkn1aP39689 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.98■□□□□ 0.63
Cdkn1aP39689 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.97■□□□□ 0.63
Cdkn1aP39689 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn1aP39689 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn1aP39689 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn1aP39689 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn1aP39689 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdkn1aP39689 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn1aP39689 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.96■□□□□ 0.63
Cdkn1aP39689 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.96■□□□□ 0.63
Cdkn1aP39689 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn1aP39689 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cdkn1aP39689 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdkn1aP39689 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn1aP39689 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdkn1aP39689 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cdkn1aP39689 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdkn1aP39689 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cdkn1aP39689 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdkn1aP39689 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdkn1aP39689 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.93■□□□□ 0.62
Cdkn1aP39689 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cdkn1aP39689 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdkn1aP39689 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkn1aP39689 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkn1aP39689 Gm27502-201ENSMUST00000183495 199 ntBASIC18.91■□□□□ 0.62
Cdkn1aP39689 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cdkn1aP39689 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdkn1aP39689 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn1aP39689 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn1aP39689 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn1aP39689 Terc-201ENSMUST00000082862 423 ntBASIC18.9■□□□□ 0.62
Cdkn1aP39689 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdkn1aP39689 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn1aP39689 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn1aP39689 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.89■□□□□ 0.61
Cdkn1aP39689 Gm12366-201ENSMUST00000121722 873 ntBASIC18.89■□□□□ 0.61
Cdkn1aP39689 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.89■□□□□ 0.61
Cdkn1aP39689 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.89■□□□□ 0.61
Cdkn1aP39689 Gm5786-201ENSMUST00000085368 882 ntBASIC18.89■□□□□ 0.61
Cdkn1aP39689 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn1aP39689 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdkn1aP39689 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.88■□□□□ 0.61
Cdkn1aP39689 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn1aP39689 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn1aP39689 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cdkn1aP39689 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.88■□□□□ 0.61
Cdkn1aP39689 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdkn1aP39689 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn1aP39689 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdkn1aP39689 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.87■□□□□ 0.61
Cdkn1aP39689 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdkn1aP39689 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn1aP39689 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn1aP39689 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdkn1aP39689 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn1aP39689 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdkn1aP39689 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.86■□□□□ 0.61
Cdkn1aP39689 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdkn1aP39689 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn1aP39689 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.85■□□□□ 0.61
Cdkn1aP39689 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn1aP39689 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cdkn1aP39689 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn1aP39689 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn1aP39689 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn1aP39689 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdkn1aP39689 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkn1aP39689 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdkn1aP39689 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn1aP39689 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdkn1aP39689 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms