Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.69■□□□□ 0.74
Slc6a1P31648 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a1P31648 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a1P31648 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc6a1P31648 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Slc6a1P31648 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Slc6a1P31648 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a1P31648 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Slc6a1P31648 Gm9397-201ENSMUST00000200125 605 ntBASIC19.68■□□□□ 0.74
Slc6a1P31648 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a1P31648 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Slc6a1P31648 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a1P31648 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slc6a1P31648 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a1P31648 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Slc6a1P31648 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc6a1P31648 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a1P31648 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc6a1P31648 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc6a1P31648 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a1P31648 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a1P31648 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc6a1P31648 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Slc6a1P31648 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a1P31648 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.65■□□□□ 0.74
Slc6a1P31648 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a1P31648 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a1P31648 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a1P31648 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc6a1P31648 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a1P31648 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a1P31648 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a1P31648 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc6a1P31648 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Slc6a1P31648 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a1P31648 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a1P31648 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc6a1P31648 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc6a1P31648 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.62■□□□□ 0.73
Slc6a1P31648 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a1P31648 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.62■□□□□ 0.73
Slc6a1P31648 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a1P31648 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a1P31648 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc6a1P31648 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc6a1P31648 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a1P31648 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc6a1P31648 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc6a1P31648 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a1P31648 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc6a1P31648 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slc6a1P31648 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.6■□□□□ 0.73
Slc6a1P31648 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.6■□□□□ 0.73
Slc6a1P31648 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a1P31648 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc6a1P31648 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a1P31648 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a1P31648 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a1P31648 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a1P31648 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc6a1P31648 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc6a1P31648 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a1P31648 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a1P31648 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.58■□□□□ 0.72
Slc6a1P31648 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.58■□□□□ 0.72
Slc6a1P31648 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.58■□□□□ 0.72
Slc6a1P31648 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a1P31648 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc6a1P31648 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a1P31648 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a1P31648 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Slc6a1P31648 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc6a1P31648 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a1P31648 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a1P31648 Gm24970-201ENSMUST00000175582 82 ntBASIC19.56■□□□□ 0.72
Slc6a1P31648 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.56■□□□□ 0.72
Slc6a1P31648 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc6a1P31648 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc6a1P31648 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a1P31648 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a1P31648 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.55■□□□□ 0.72
Slc6a1P31648 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.55■□□□□ 0.72
Slc6a1P31648 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Slc6a1P31648 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Slc6a1P31648 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a1P31648 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a1P31648 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc6a1P31648 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a1P31648 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a1P31648 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a1P31648 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a1P31648 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a1P31648 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc6a1P31648 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Slc6a1P31648 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Slc6a1P31648 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.52■□□□□ 0.72
Slc6a1P31648 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a1P31648 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc6a1P31648 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Slc6a1P31648 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 1267.9 ms