Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tnfrsf1aP25118 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
Tnfrsf1aP25118 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.14■□□□□ 0.65
Tnfrsf1aP25118 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf1aP25118 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tnfrsf1aP25118 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tnfrsf1aP25118 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf1aP25118 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Tnfrsf1aP25118 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tnfrsf1aP25118 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.11■□□□□ 0.65
Tnfrsf1aP25118 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tnfrsf1aP25118 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.09■□□□□ 0.65
Tnfrsf1aP25118 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf1aP25118 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tnfrsf1aP25118 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tnfrsf1aP25118 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf1aP25118 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf1aP25118 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tnfrsf1aP25118 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tnfrsf1aP25118 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnfrsf1aP25118 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.06■□□□□ 0.64
Tnfrsf1aP25118 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnfrsf1aP25118 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.04■□□□□ 0.64
Tnfrsf1aP25118 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1aP25118 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1aP25118 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf1aP25118 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf1aP25118 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1aP25118 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1aP25118 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf1aP25118 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf1aP25118 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Gm37136-201ENSMUST00000194368 194 ntBASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf1aP25118 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Gm8503-201ENSMUST00000118131 455 ntBASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf1aP25118 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf1aP25118 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tnfrsf1aP25118 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf1aP25118 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.95■□□□□ 0.62
Tnfrsf1aP25118 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Tnfrsf1aP25118 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.93■□□□□ 0.62
Tnfrsf1aP25118 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tnfrsf1aP25118 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 2439.3 ms