Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cd48P18181 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cd48P18181 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd48P18181 Nkain2-201ENSMUST00000092602 558 ntBASIC20.45■□□□□ 0.86
Cd48P18181 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cd48P18181 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Cd48P18181 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cd48P18181 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Cd48P18181 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cd48P18181 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Cd48P18181 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.44■□□□□ 0.86
Cd48P18181 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd48P18181 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd48P18181 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd48P18181 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cd48P18181 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cd48P18181 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd48P18181 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd48P18181 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.42■□□□□ 0.86
Cd48P18181 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cd48P18181 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cd48P18181 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.41■□□□□ 0.86
Cd48P18181 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cd48P18181 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd48P18181 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd48P18181 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd48P18181 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.41■□□□□ 0.86
Cd48P18181 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd48P18181 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cd48P18181 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd48P18181 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cd48P18181 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cd48P18181 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cd48P18181 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cd48P18181 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cd48P18181 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cd48P18181 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd48P18181 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.39■□□□□ 0.85
Cd48P18181 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Cd48P18181 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cd48P18181 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cd48P18181 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cd48P18181 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cd48P18181 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cd48P18181 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd48P18181 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd48P18181 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd48P18181 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd48P18181 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cd48P18181 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cd48P18181 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cd48P18181 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Cd48P18181 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.35■□□□□ 0.85
Cd48P18181 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.35■□□□□ 0.85
Cd48P18181 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd48P18181 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cd48P18181 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cd48P18181 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Cd48P18181 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd48P18181 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cd48P18181 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cd48P18181 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cd48P18181 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.33■□□□□ 0.85
Cd48P18181 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd48P18181 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd48P18181 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd48P18181 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cd48P18181 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.32■□□□□ 0.84
Cd48P18181 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.31■□□□□ 0.84
Cd48P18181 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.31■□□□□ 0.84
Cd48P18181 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd48P18181 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd48P18181 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cd48P18181 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd48P18181 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd48P18181 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd48P18181 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd48P18181 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd48P18181 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.29■□□□□ 0.84
Cd48P18181 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cd48P18181 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd48P18181 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd48P18181 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd48P18181 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.28■□□□□ 0.84
Cd48P18181 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd48P18181 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd48P18181 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cd48P18181 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd48P18181 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Cd48P18181 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.27■□□□□ 0.84
Cd48P18181 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd48P18181 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cd48P18181 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd48P18181 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd48P18181 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd48P18181 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd48P18181 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd48P18181 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cd48P18181 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd48P18181 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms