Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctla2aP12399 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Ctla2aP12399 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctla2aP12399 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctla2aP12399 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctla2aP12399 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ctla2aP12399 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctla2aP12399 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctla2aP12399 Gm8109-201ENSMUST00000194076 746 ntBASIC20.71■□□□□ 0.91
Ctla2aP12399 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.71■□□□□ 0.91
Ctla2aP12399 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctla2aP12399 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ctla2aP12399 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.7■□□□□ 0.9
Ctla2aP12399 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctla2aP12399 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctla2aP12399 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ctla2aP12399 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctla2aP12399 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctla2aP12399 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctla2aP12399 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctla2aP12399 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.67■□□□□ 0.9
Ctla2aP12399 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctla2aP12399 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctla2aP12399 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctla2aP12399 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctla2aP12399 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctla2aP12399 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctla2aP12399 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctla2aP12399 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ctla2aP12399 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ctla2aP12399 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctla2aP12399 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.65■□□□□ 0.9
Ctla2aP12399 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ctla2aP12399 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ctla2aP12399 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctla2aP12399 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.64■□□□□ 0.89
Ctla2aP12399 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ctla2aP12399 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ctla2aP12399 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ctla2aP12399 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctla2aP12399 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ctla2aP12399 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctla2aP12399 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctla2aP12399 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ctla2aP12399 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Ctla2aP12399 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ctla2aP12399 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctla2aP12399 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctla2aP12399 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ctla2aP12399 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ctla2aP12399 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctla2aP12399 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ctla2aP12399 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.59■□□□□ 0.89
Ctla2aP12399 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ctla2aP12399 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Ctla2aP12399 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ctla2aP12399 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ctla2aP12399 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctla2aP12399 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctla2aP12399 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.57■□□□□ 0.88
Ctla2aP12399 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ctla2aP12399 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ctla2aP12399 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.57■□□□□ 0.88
Ctla2aP12399 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ctla2aP12399 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ctla2aP12399 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctla2aP12399 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctla2aP12399 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ctla2aP12399 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctla2aP12399 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ctla2aP12399 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ctla2aP12399 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.55■□□□□ 0.88
Ctla2aP12399 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.55■□□□□ 0.88
Ctla2aP12399 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.55■□□□□ 0.88
Ctla2aP12399 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ctla2aP12399 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.55■□□□□ 0.88
Ctla2aP12399 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ctla2aP12399 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctla2aP12399 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ctla2aP12399 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctla2aP12399 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctla2aP12399 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ctla2aP12399 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctla2aP12399 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctla2aP12399 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctla2aP12399 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ctla2aP12399 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ctla2aP12399 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms