Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa3P02831 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa3P02831 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.12■□□□□ 0.65
Hoxa3P02831 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa3P02831 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa3P02831 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.11■□□□□ 0.65
Hoxa3P02831 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.11■□□□□ 0.65
Hoxa3P02831 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.11■□□□□ 0.65
Hoxa3P02831 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa3P02831 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa3P02831 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa3P02831 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa3P02831 Gm9806-201ENSMUST00000051080 552 ntBASIC19.1■□□□□ 0.65
Hoxa3P02831 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa3P02831 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxa3P02831 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.09■□□□□ 0.65
Hoxa3P02831 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxa3P02831 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxa3P02831 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxa3P02831 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.09■□□□□ 0.65
Hoxa3P02831 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.09■□□□□ 0.65
Hoxa3P02831 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxa3P02831 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxa3P02831 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.08■□□□□ 0.65
Hoxa3P02831 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxa3P02831 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Hoxa3P02831 Gm16437-201ENSMUST00000025669 507 ntBASIC19.08■□□□□ 0.64
Hoxa3P02831 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxa3P02831 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hoxa3P02831 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hoxa3P02831 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa3P02831 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.07■□□□□ 0.64
Hoxa3P02831 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa3P02831 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa3P02831 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxa3P02831 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxa3P02831 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.06■□□□□ 0.64
Hoxa3P02831 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hoxa3P02831 Gm11687-201ENSMUST00000118911 886 ntBASIC19.05■□□□□ 0.64
Hoxa3P02831 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa3P02831 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa3P02831 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa3P02831 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa3P02831 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa3P02831 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxa3P02831 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa3P02831 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxa3P02831 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.04■□□□□ 0.64
Hoxa3P02831 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa3P02831 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa3P02831 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa3P02831 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.03■□□□□ 0.64
Hoxa3P02831 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa3P02831 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa3P02831 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.02■□□□□ 0.64
Hoxa3P02831 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa3P02831 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.02■□□□□ 0.64
Hoxa3P02831 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.02■□□□□ 0.64
Hoxa3P02831 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa3P02831 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.01■□□□□ 0.63
Hoxa3P02831 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa3P02831 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxa3P02831 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxa3P02831 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa3P02831 Gm9812-201ENSMUST00000061934 968 ntBASIC19■□□□□ 0.63
Hoxa3P02831 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa3P02831 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa3P02831 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxa3P02831 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hoxa3P02831 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa3P02831 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hoxa3P02831 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Hoxa3P02831 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa3P02831 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.98■□□□□ 0.63
Hoxa3P02831 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.98■□□□□ 0.63
Hoxa3P02831 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa3P02831 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa3P02831 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa3P02831 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa3P02831 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa3P02831 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Hoxa3P02831 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.96■□□□□ 0.63
Hoxa3P02831 Gm12366-201ENSMUST00000121722 873 ntBASIC18.96■□□□□ 0.63
Hoxa3P02831 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxa3P02831 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.96■□□□□ 0.63
Hoxa3P02831 Gm5786-201ENSMUST00000085368 882 ntBASIC18.96■□□□□ 0.63
Hoxa3P02831 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa3P02831 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa3P02831 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa3P02831 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa3P02831 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa3P02831 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa3P02831 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hoxa3P02831 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxa3P02831 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxa3P02831 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.95■□□□□ 0.62
Hoxa3P02831 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxa3P02831 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hoxa3P02831 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.95■□□□□ 0.62
Hoxa3P02831 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms