Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC28.66■■■□□ 2.18
Cops6O88545 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Cops6O88545 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
Cops6O88545 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Cops6O88545 Gm7332-201ENSMUST00000118351 454 ntBASIC28.64■■■□□ 2.18
Cops6O88545 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Cops6O88545 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Cops6O88545 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.64■■■□□ 2.18
Cops6O88545 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cops6O88545 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cops6O88545 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cops6O88545 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.61■■■□□ 2.17
Cops6O88545 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Cops6O88545 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
Cops6O88545 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.6■■■□□ 2.17
Cops6O88545 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Cops6O88545 Gm14523-201ENSMUST00000117260 558 ntBASIC28.59■■■□□ 2.17
Cops6O88545 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cops6O88545 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Cops6O88545 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.58■■■□□ 2.17
Cops6O88545 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Cops6O88545 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.58■■■□□ 2.17
Cops6O88545 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Cops6O88545 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Cops6O88545 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.57■■■□□ 2.16
Cops6O88545 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.57■■■□□ 2.16
Cops6O88545 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Cops6O88545 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Cops6O88545 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.56■■■□□ 2.16
Cops6O88545 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cops6O88545 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
Cops6O88545 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.55■■■□□ 2.16
Cops6O88545 Terc-201ENSMUST00000082862 423 ntBASIC28.55■■■□□ 2.16
Cops6O88545 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Cops6O88545 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cops6O88545 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Cops6O88545 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cops6O88545 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cops6O88545 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cops6O88545 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Cops6O88545 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cops6O88545 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Cops6O88545 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Cops6O88545 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
Cops6O88545 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cops6O88545 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
Cops6O88545 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.49■■■□□ 2.15
Cops6O88545 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cops6O88545 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cops6O88545 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cops6O88545 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cops6O88545 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cops6O88545 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.47■■■□□ 2.15
Cops6O88545 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.47■■■□□ 2.15
Cops6O88545 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.47■■■□□ 2.15
Cops6O88545 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cops6O88545 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC28.46■■■□□ 2.15
Cops6O88545 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cops6O88545 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Cops6O88545 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.15
Cops6O88545 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cops6O88545 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cops6O88545 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Cops6O88545 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Cops6O88545 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.44■■■□□ 2.14
Cops6O88545 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.44■■■□□ 2.14
Cops6O88545 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cops6O88545 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Cops6O88545 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cops6O88545 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cops6O88545 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Cops6O88545 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cops6O88545 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.41■■■□□ 2.14
Cops6O88545 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cops6O88545 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Cops6O88545 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Cops6O88545 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cops6O88545 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cops6O88545 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cops6O88545 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.39■■■□□ 2.14
Cops6O88545 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cops6O88545 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cops6O88545 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cops6O88545 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cops6O88545 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.36■■■□□ 2.13
Cops6O88545 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.36■■■□□ 2.13
Cops6O88545 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.36■■■□□ 2.13
Cops6O88545 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cops6O88545 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC28.36■■■□□ 2.13
Cops6O88545 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Cops6O88545 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Cops6O88545 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.35■■■□□ 2.13
Cops6O88545 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cops6O88545 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cops6O88545 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.34■■■□□ 2.13
Cops6O88545 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Cops6O88545 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cops6O88545 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cops6O88545 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.33■■■□□ 2.13
Cops6O88545 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.32■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms