Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tgfbr3O88393 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tgfbr3O88393 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tgfbr3O88393 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Tgfbr3O88393 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tgfbr3O88393 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tgfbr3O88393 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tgfbr3O88393 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tgfbr3O88393 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.17■■□□□ 1.14
Tgfbr3O88393 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Tgfbr3O88393 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tgfbr3O88393 Gm10420-201ENSMUST00000121713 882 ntBASIC22.16■■□□□ 1.14
Tgfbr3O88393 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.16■■□□□ 1.14
Tgfbr3O88393 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.15■■□□□ 1.14
Tgfbr3O88393 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Terc-201ENSMUST00000082862 423 ntBASIC22.15■■□□□ 1.14
Tgfbr3O88393 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tgfbr3O88393 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tgfbr3O88393 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.11■■□□□ 1.13
Tgfbr3O88393 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.11■■□□□ 1.13
Tgfbr3O88393 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tgfbr3O88393 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.1■■□□□ 1.13
Tgfbr3O88393 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.1■■□□□ 1.13
Tgfbr3O88393 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tgfbr3O88393 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Tgfbr3O88393 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.06■■□□□ 1.12
Tgfbr3O88393 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tgfbr3O88393 Gm5921-201ENSMUST00000075898 882 ntBASIC22.06■■□□□ 1.12
Tgfbr3O88393 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.06■■□□□ 1.12
Tgfbr3O88393 Gm5812-201ENSMUST00000061073 957 ntBASIC22.05■■□□□ 1.12
Tgfbr3O88393 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tgfbr3O88393 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.04■■□□□ 1.12
Tgfbr3O88393 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tgfbr3O88393 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tgfbr3O88393 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
Tgfbr3O88393 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Tgfbr3O88393 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tgfbr3O88393 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.02■■□□□ 1.12
Tgfbr3O88393 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tgfbr3O88393 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Tgfbr3O88393 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tgfbr3O88393 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Tgfbr3O88393 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.01■■□□□ 1.11
Tgfbr3O88393 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tgfbr3O88393 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Tgfbr3O88393 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Tgfbr3O88393 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tgfbr3O88393 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tgfbr3O88393 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tgfbr3O88393 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tgfbr3O88393 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tgfbr3O88393 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Tgfbr3O88393 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tgfbr3O88393 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tgfbr3O88393 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tgfbr3O88393 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.98■■□□□ 1.11
Tgfbr3O88393 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tgfbr3O88393 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tgfbr3O88393 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.95■■□□□ 1.1
Tgfbr3O88393 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tgfbr3O88393 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms