Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tgfbr3O88393 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tgfbr3O88393 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tgfbr3O88393 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Tgfbr3O88393 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tgfbr3O88393 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tgfbr3O88393 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tgfbr3O88393 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Tgfbr3O88393 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tgfbr3O88393 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.17■■□□□ 1.14
Tgfbr3O88393 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Tgfbr3O88393 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tgfbr3O88393 Gm10420-201ENSMUST00000121713 882 ntBASIC22.16■■□□□ 1.14
Tgfbr3O88393 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.16■■□□□ 1.14
Tgfbr3O88393 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.15■■□□□ 1.14
Tgfbr3O88393 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Terc-201ENSMUST00000082862 423 ntBASIC22.15■■□□□ 1.14
Tgfbr3O88393 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Tgfbr3O88393 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tgfbr3O88393 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Tgfbr3O88393 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tgfbr3O88393 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Tgfbr3O88393 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.11■■□□□ 1.13
Tgfbr3O88393 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.11■■□□□ 1.13
Tgfbr3O88393 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Tgfbr3O88393 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Tgfbr3O88393 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.1■■□□□ 1.13
Tgfbr3O88393 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.1■■□□□ 1.13
Tgfbr3O88393 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Tgfbr3O88393 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Tgfbr3O88393 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Tgfbr3O88393 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.06■■□□□ 1.12
Tgfbr3O88393 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Tgfbr3O88393 Gm5921-201ENSMUST00000075898 882 ntBASIC22.06■■□□□ 1.12
Tgfbr3O88393 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.06■■□□□ 1.12
Tgfbr3O88393 Gm5812-201ENSMUST00000061073 957 ntBASIC22.05■■□□□ 1.12
Tgfbr3O88393 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tgfbr3O88393 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.04■■□□□ 1.12
Tgfbr3O88393 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tgfbr3O88393 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tgfbr3O88393 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
Tgfbr3O88393 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Tgfbr3O88393 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Tgfbr3O88393 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.02■■□□□ 1.12
Tgfbr3O88393 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tgfbr3O88393 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Tgfbr3O88393 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tgfbr3O88393 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Tgfbr3O88393 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.01■■□□□ 1.11
Tgfbr3O88393 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Tgfbr3O88393 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Tgfbr3O88393 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Tgfbr3O88393 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tgfbr3O88393 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tgfbr3O88393 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tgfbr3O88393 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Tgfbr3O88393 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Tgfbr3O88393 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Tgfbr3O88393 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tgfbr3O88393 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tgfbr3O88393 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tgfbr3O88393 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.98■■□□□ 1.11
Tgfbr3O88393 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tgfbr3O88393 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tgfbr3O88393 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tgfbr3O88393 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tgfbr3O88393 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.95■■□□□ 1.1
Tgfbr3O88393 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Tgfbr3O88393 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms