Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.35■■■□□ 2.13
Mmp8O70138 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Mmp8O70138 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Mmp8O70138 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Mmp8O70138 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.35■■■□□ 2.13
Mmp8O70138 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.34■■■□□ 2.13
Mmp8O70138 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Mmp8O70138 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Mmp8O70138 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Mmp8O70138 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Mmp8O70138 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.33■■■□□ 2.13
Mmp8O70138 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.33■■■□□ 2.13
Mmp8O70138 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Mmp8O70138 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
Mmp8O70138 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Mmp8O70138 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Mmp8O70138 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Mmp8O70138 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Mmp8O70138 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Mmp8O70138 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Mmp8O70138 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Mmp8O70138 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Mmp8O70138 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Mmp8O70138 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.3■■■□□ 2.12
Mmp8O70138 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Mmp8O70138 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Mmp8O70138 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Mmp8O70138 Mir3960-201ENSMUST00000198213 73 ntBASIC28.29■■■□□ 2.12
Mmp8O70138 Gm45364-201ENSMUST00000210883 159 ntBASIC28.29■■■□□ 2.12
Mmp8O70138 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.29■■■□□ 2.12
Mmp8O70138 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Mmp8O70138 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Mmp8O70138 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Mmp8O70138 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Mmp8O70138 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Mmp8O70138 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Mmp8O70138 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.12
Mmp8O70138 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Mmp8O70138 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.26■■■□□ 2.11
Mmp8O70138 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.26■■■□□ 2.11
Mmp8O70138 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Mmp8O70138 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Mmp8O70138 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Mmp8O70138 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Mmp8O70138 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Mmp8O70138 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Mmp8O70138 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Mmp8O70138 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.23■■■□□ 2.11
Mmp8O70138 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Mmp8O70138 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Mmp8O70138 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Mmp8O70138 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Mmp8O70138 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.22■■■□□ 2.11
Mmp8O70138 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Mmp8O70138 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Mmp8O70138 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.21■■■□□ 2.11
Mmp8O70138 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.21■■■□□ 2.11
Mmp8O70138 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.21■■■□□ 2.11
Mmp8O70138 Gm9812-201ENSMUST00000061934 968 ntBASIC28.21■■■□□ 2.11
Mmp8O70138 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.2■■■□□ 2.11
Mmp8O70138 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Mmp8O70138 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Mmp8O70138 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.2■■■□□ 2.1
Mmp8O70138 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
Mmp8O70138 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Mmp8O70138 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.19■■■□□ 2.1
Mmp8O70138 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Mmp8O70138 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Mmp8O70138 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Mmp8O70138 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Mmp8O70138 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.18■■■□□ 2.1
Mmp8O70138 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.17■■■□□ 2.1
Mmp8O70138 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Mmp8O70138 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.16■■■□□ 2.1
Mmp8O70138 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Mmp8O70138 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.14■■■□□ 2.1
Mmp8O70138 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Mmp8O70138 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Mmp8O70138 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Mmp8O70138 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Mmp8O70138 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.12■■■□□ 2.09
Mmp8O70138 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Mmp8O70138 Gm6311-201ENSMUST00000073790 878 ntBASIC28.12■■■□□ 2.09
Mmp8O70138 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Mmp8O70138 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.11■■■□□ 2.09
Mmp8O70138 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Mmp8O70138 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.11■■■□□ 2.09
Mmp8O70138 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Mmp8O70138 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.1■■■□□ 2.09
Mmp8O70138 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Mmp8O70138 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Mmp8O70138 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Mmp8O70138 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Mmp8O70138 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Mmp8O70138 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Mmp8O70138 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Mmp8O70138 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Mmp8O70138 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Mmp8O70138 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Mmp8O70138 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 176 ms