Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.98■□□□□ 0.31
Rpl35aO55142 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl35aO55142 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl35aO55142 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl35aO55142 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl35aO55142 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl35aO55142 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rpl35aO55142 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl35aO55142 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl35aO55142 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.96■□□□□ 0.31
Rpl35aO55142 Mir3960-201ENSMUST00000198213 73 ntBASIC16.96■□□□□ 0.31
Rpl35aO55142 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl35aO55142 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rpl35aO55142 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.95■□□□□ 0.3
Rpl35aO55142 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rpl35aO55142 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpl35aO55142 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rpl35aO55142 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl35aO55142 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl35aO55142 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl35aO55142 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rpl35aO55142 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl35aO55142 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl35aO55142 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl35aO55142 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpl35aO55142 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl35aO55142 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl35aO55142 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpl35aO55142 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpl35aO55142 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpl35aO55142 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpl35aO55142 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.92■□□□□ 0.3
Rpl35aO55142 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rpl35aO55142 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.92■□□□□ 0.3
Rpl35aO55142 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpl35aO55142 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rpl35aO55142 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpl35aO55142 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.91■□□□□ 0.3
Rpl35aO55142 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.91■□□□□ 0.3
Rpl35aO55142 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpl35aO55142 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rpl35aO55142 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpl35aO55142 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpl35aO55142 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpl35aO55142 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Rpl35aO55142 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.89■□□□□ 0.29
Rpl35aO55142 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpl35aO55142 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpl35aO55142 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.89■□□□□ 0.29
Rpl35aO55142 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl35aO55142 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rpl35aO55142 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl35aO55142 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl35aO55142 Gm45364-201ENSMUST00000210883 159 ntBASIC16.88■□□□□ 0.29
Rpl35aO55142 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl35aO55142 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpl35aO55142 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.87■□□□□ 0.29
Rpl35aO55142 Scarna2-201ENSMUST00000157560 414 ntBASIC16.87■□□□□ 0.29
Rpl35aO55142 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.87■□□□□ 0.29
Rpl35aO55142 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpl35aO55142 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpl35aO55142 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpl35aO55142 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpl35aO55142 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpl35aO55142 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpl35aO55142 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpl35aO55142 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpl35aO55142 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Rpl35aO55142 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
Rpl35aO55142 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rpl35aO55142 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpl35aO55142 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpl35aO55142 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpl35aO55142 Gm11175-201ENSMUST00000116172 543 ntBASIC16.85■□□□□ 0.29
Rpl35aO55142 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.85■□□□□ 0.29
Rpl35aO55142 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpl35aO55142 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC16.85■□□□□ 0.29
Rpl35aO55142 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.84■□□□□ 0.29
Rpl35aO55142 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.84■□□□□ 0.29
Rpl35aO55142 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpl35aO55142 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpl35aO55142 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpl35aO55142 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpl35aO55142 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Rpl35aO55142 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpl35aO55142 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpl35aO55142 Gm16437-201ENSMUST00000025669 507 ntBASIC16.83■□□□□ 0.28
Rpl35aO55142 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpl35aO55142 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpl35aO55142 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpl35aO55142 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl35aO55142 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl35aO55142 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl35aO55142 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rpl35aO55142 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl35aO55142 Gm11687-201ENSMUST00000118911 886 ntBASIC16.82■□□□□ 0.28
Rpl35aO55142 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpl35aO55142 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl35aO55142 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpl35aO55142 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms