Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2b3O09039 Gm4799-201ENSMUST00000095396 657 ntBASIC20.33■□□□□ 0.85
Sh2b3O09039 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2b3O09039 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2b3O09039 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2b3O09039 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
Sh2b3O09039 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2b3O09039 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2b3O09039 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2b3O09039 Scarna2-201ENSMUST00000157560 414 ntBASIC20.31■□□□□ 0.84
Sh2b3O09039 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh2b3O09039 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2b3O09039 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.31■□□□□ 0.84
Sh2b3O09039 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh2b3O09039 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2b3O09039 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2b3O09039 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2b3O09039 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sh2b3O09039 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2b3O09039 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2b3O09039 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
Sh2b3O09039 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh2b3O09039 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2b3O09039 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2b3O09039 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2b3O09039 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2b3O09039 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2b3O09039 Gm11687-201ENSMUST00000118911 886 ntBASIC20.28■□□□□ 0.84
Sh2b3O09039 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2b3O09039 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2b3O09039 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sh2b3O09039 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2b3O09039 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2b3O09039 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2b3O09039 Gm9806-201ENSMUST00000051080 552 ntBASIC20.27■□□□□ 0.84
Sh2b3O09039 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2b3O09039 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2b3O09039 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2b3O09039 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2b3O09039 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2b3O09039 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2b3O09039 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.26■□□□□ 0.83
Sh2b3O09039 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.26■□□□□ 0.83
Sh2b3O09039 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sh2b3O09039 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.25■□□□□ 0.83
Sh2b3O09039 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.25■□□□□ 0.83
Sh2b3O09039 Mir3960-201ENSMUST00000198213 73 ntBASIC20.25■□□□□ 0.83
Sh2b3O09039 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2b3O09039 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sh2b3O09039 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sh2b3O09039 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2b3O09039 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh2b3O09039 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2b3O09039 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh2b3O09039 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh2b3O09039 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2b3O09039 Gm16437-201ENSMUST00000025669 507 ntBASIC20.22■□□□□ 0.83
Sh2b3O09039 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh2b3O09039 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2b3O09039 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2b3O09039 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2b3O09039 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh2b3O09039 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2b3O09039 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.2■□□□□ 0.82
Sh2b3O09039 Gm37136-201ENSMUST00000194368 194 ntBASIC20.2■□□□□ 0.82
Sh2b3O09039 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh2b3O09039 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2b3O09039 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh2b3O09039 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2b3O09039 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2b3O09039 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2b3O09039 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2b3O09039 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh2b3O09039 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2b3O09039 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2b3O09039 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2b3O09039 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2b3O09039 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh2b3O09039 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh2b3O09039 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sh2b3O09039 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh2b3O09039 Gm45364-201ENSMUST00000210883 159 ntBASIC20.15■□□□□ 0.82
Sh2b3O09039 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2b3O09039 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh2b3O09039 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sh2b3O09039 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sh2b3O09039 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2b3O09039 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2b3O09039 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.14■□□□□ 0.81
Sh2b3O09039 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh2b3O09039 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2b3O09039 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.13■□□□□ 0.81
Sh2b3O09039 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2b3O09039 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh2b3O09039 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh2b3O09039 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.12■□□□□ 0.81
Sh2b3O09039 Gm12366-201ENSMUST00000121722 873 ntBASIC20.12■□□□□ 0.81
Sh2b3O09039 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.12■□□□□ 0.81
Sh2b3O09039 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.12■□□□□ 0.81
Sh2b3O09039 Gm5786-201ENSMUST00000085368 882 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms