Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1bO08603 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1bO08603 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1bO08603 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1bO08603 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1bO08603 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1bO08603 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raet1bO08603 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raet1bO08603 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Raet1bO08603 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1bO08603 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1bO08603 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1bO08603 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.31■□□□□ 0.84
Raet1bO08603 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1bO08603 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1bO08603 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1bO08603 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.3■□□□□ 0.84
Raet1bO08603 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1bO08603 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1bO08603 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1bO08603 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Raet1bO08603 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.28■□□□□ 0.84
Raet1bO08603 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1bO08603 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1bO08603 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1bO08603 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1bO08603 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Raet1bO08603 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.27■□□□□ 0.83
Raet1bO08603 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1bO08603 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.26■□□□□ 0.83
Raet1bO08603 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1bO08603 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1bO08603 Gm7432-201ENSMUST00000210343 879 ntBASIC20.26■□□□□ 0.83
Raet1bO08603 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Raet1bO08603 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raet1bO08603 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Raet1bO08603 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1bO08603 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1bO08603 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.24■□□□□ 0.83
Raet1bO08603 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1bO08603 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Raet1bO08603 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1bO08603 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1bO08603 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1bO08603 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.23■□□□□ 0.83
Raet1bO08603 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raet1bO08603 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1bO08603 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1bO08603 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1bO08603 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Raet1bO08603 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Raet1bO08603 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1bO08603 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1bO08603 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raet1bO08603 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1bO08603 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.21■□□□□ 0.83
Raet1bO08603 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1bO08603 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raet1bO08603 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Raet1bO08603 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Raet1bO08603 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Raet1bO08603 Gm11599-201ENSMUST00000118720 878 ntBASIC20.19■□□□□ 0.82
Raet1bO08603 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raet1bO08603 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Raet1bO08603 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Raet1bO08603 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1bO08603 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Raet1bO08603 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Raet1bO08603 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1bO08603 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1bO08603 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1bO08603 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1bO08603 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raet1bO08603 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Raet1bO08603 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Raet1bO08603 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.17■□□□□ 0.82
Raet1bO08603 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1bO08603 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Raet1bO08603 Gm4799-201ENSMUST00000095396 657 ntBASIC20.16■□□□□ 0.82
Raet1bO08603 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1bO08603 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1bO08603 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Raet1bO08603 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Raet1bO08603 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Raet1bO08603 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1bO08603 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
Raet1bO08603 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1bO08603 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1bO08603 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raet1bO08603 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1bO08603 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1bO08603 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.13■□□□□ 0.81
Raet1bO08603 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.13■□□□□ 0.81
Raet1bO08603 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raet1bO08603 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raet1bO08603 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.12■□□□□ 0.81
Raet1bO08603 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.12■□□□□ 0.81
Raet1bO08603 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raet1bO08603 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raet1bO08603 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 344.4 ms