Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Gm5921-201ENSMUST00000075898 882 ntBASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
B020004C17RikJ3QP07 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
B020004C17RikJ3QP07 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
B020004C17RikJ3QP07 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
B020004C17RikJ3QP07 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
B020004C17RikJ3QP07 Gm5812-201ENSMUST00000061073 957 ntBASIC26.5■■□□□ 1.83
B020004C17RikJ3QP07 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.5■■□□□ 1.83
B020004C17RikJ3QP07 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
B020004C17RikJ3QP07 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.49■■□□□ 1.83
B020004C17RikJ3QP07 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
B020004C17RikJ3QP07 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
B020004C17RikJ3QP07 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
B020004C17RikJ3QP07 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
B020004C17RikJ3QP07 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
B020004C17RikJ3QP07 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
B020004C17RikJ3QP07 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.46■■□□□ 1.83
B020004C17RikJ3QP07 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
B020004C17RikJ3QP07 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
B020004C17RikJ3QP07 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
B020004C17RikJ3QP07 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
B020004C17RikJ3QP07 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.44■■□□□ 1.82
B020004C17RikJ3QP07 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
B020004C17RikJ3QP07 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
B020004C17RikJ3QP07 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.43■■□□□ 1.82
B020004C17RikJ3QP07 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
B020004C17RikJ3QP07 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
B020004C17RikJ3QP07 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
B020004C17RikJ3QP07 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.41■■□□□ 1.82
B020004C17RikJ3QP07 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.41■■□□□ 1.82
B020004C17RikJ3QP07 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
B020004C17RikJ3QP07 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.4■■□□□ 1.82
B020004C17RikJ3QP07 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
B020004C17RikJ3QP07 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
B020004C17RikJ3QP07 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.39■■□□□ 1.82
B020004C17RikJ3QP07 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
B020004C17RikJ3QP07 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
B020004C17RikJ3QP07 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
B020004C17RikJ3QP07 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
B020004C17RikJ3QP07 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
B020004C17RikJ3QP07 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
B020004C17RikJ3QP07 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
B020004C17RikJ3QP07 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
B020004C17RikJ3QP07 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
B020004C17RikJ3QP07 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.36■■□□□ 1.81
B020004C17RikJ3QP07 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.34■■□□□ 1.81
B020004C17RikJ3QP07 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
B020004C17RikJ3QP07 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
B020004C17RikJ3QP07 Gm44428-201ENSMUST00000204474 874 ntBASIC26.32■■□□□ 1.8
B020004C17RikJ3QP07 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
B020004C17RikJ3QP07 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
B020004C17RikJ3QP07 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.32■■□□□ 1.8
B020004C17RikJ3QP07 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
B020004C17RikJ3QP07 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
B020004C17RikJ3QP07 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
B020004C17RikJ3QP07 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.3■■□□□ 1.8
B020004C17RikJ3QP07 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
B020004C17RikJ3QP07 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.28■■□□□ 1.8
B020004C17RikJ3QP07 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
B020004C17RikJ3QP07 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
B020004C17RikJ3QP07 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
B020004C17RikJ3QP07 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
B020004C17RikJ3QP07 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
B020004C17RikJ3QP07 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
B020004C17RikJ3QP07 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.25■■□□□ 1.79
B020004C17RikJ3QP07 Gm15546-201ENSMUST00000122095 826 ntBASIC26.25■■□□□ 1.79
B020004C17RikJ3QP07 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
B020004C17RikJ3QP07 Gm22567-201ENSMUST00000175542 342 ntBASIC26.24■■□□□ 1.79
B020004C17RikJ3QP07 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
B020004C17RikJ3QP07 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
B020004C17RikJ3QP07 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
B020004C17RikJ3QP07 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
B020004C17RikJ3QP07 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
B020004C17RikJ3QP07 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
B020004C17RikJ3QP07 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
B020004C17RikJ3QP07 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
B020004C17RikJ3QP07 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
B020004C17RikJ3QP07 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.22■■□□□ 1.79
B020004C17RikJ3QP07 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.21■■□□□ 1.79
B020004C17RikJ3QP07 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
B020004C17RikJ3QP07 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
B020004C17RikJ3QP07 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
B020004C17RikJ3QP07 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
B020004C17RikJ3QP07 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
B020004C17RikJ3QP07 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
B020004C17RikJ3QP07 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms