Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tmf1B9EKI3 Gm11175-201ENSMUST00000116172 543 ntBASIC31.42■■■□□ 2.62
Tmf1B9EKI3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Tmf1B9EKI3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.41■■■□□ 2.62
Tmf1B9EKI3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.4■■■□□ 2.62
Tmf1B9EKI3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Tmf1B9EKI3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Tmf1B9EKI3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Tmf1B9EKI3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Tmf1B9EKI3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Tmf1B9EKI3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.38■■■□□ 2.61
Tmf1B9EKI3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Tmf1B9EKI3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC31.36■■■□□ 2.61
Tmf1B9EKI3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC31.36■■■□□ 2.61
Tmf1B9EKI3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tmf1B9EKI3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.35■■■□□ 2.61
Tmf1B9EKI3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tmf1B9EKI3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Tmf1B9EKI3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Tmf1B9EKI3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tmf1B9EKI3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tmf1B9EKI3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tmf1B9EKI3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
Tmf1B9EKI3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.32■■■□□ 2.6
Tmf1B9EKI3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Tmf1B9EKI3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tmf1B9EKI3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.31■■■□□ 2.6
Tmf1B9EKI3 Scarna2-201ENSMUST00000157560 414 ntBASIC31.31■■■□□ 2.6
Tmf1B9EKI3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tmf1B9EKI3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tmf1B9EKI3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tmf1B9EKI3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tmf1B9EKI3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tmf1B9EKI3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tmf1B9EKI3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tmf1B9EKI3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Tmf1B9EKI3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Tmf1B9EKI3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tmf1B9EKI3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Tmf1B9EKI3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Tmf1B9EKI3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tmf1B9EKI3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tmf1B9EKI3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tmf1B9EKI3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Tmf1B9EKI3 Gm9806-201ENSMUST00000051080 552 ntBASIC31.27■■■□□ 2.6
Tmf1B9EKI3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Tmf1B9EKI3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Tmf1B9EKI3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tmf1B9EKI3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC31.26■■■□□ 2.59
Tmf1B9EKI3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
Tmf1B9EKI3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Tmf1B9EKI3 AC153911.1-201ENSMUST00000220378 758 ntBASIC31.26■■■□□ 2.59
Tmf1B9EKI3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Tmf1B9EKI3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Tmf1B9EKI3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tmf1B9EKI3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tmf1B9EKI3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tmf1B9EKI3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Tmf1B9EKI3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Tmf1B9EKI3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
Tmf1B9EKI3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Tmf1B9EKI3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Tmf1B9EKI3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Tmf1B9EKI3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tmf1B9EKI3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tmf1B9EKI3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tmf1B9EKI3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
Tmf1B9EKI3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Tmf1B9EKI3 Gm16437-201ENSMUST00000025669 507 ntBASIC31.2■■■□□ 2.59
Tmf1B9EKI3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Tmf1B9EKI3 Cap2-205ENSMUST00000225824 1634 ntBASIC31.2■■■□□ 2.58
Tmf1B9EKI3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Tmf1B9EKI3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Tmf1B9EKI3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC31.18■■■□□ 2.58
Tmf1B9EKI3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
Tmf1B9EKI3 Gm11687-201ENSMUST00000118911 886 ntBASIC31.18■■■□□ 2.58
Tmf1B9EKI3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Tmf1B9EKI3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tmf1B9EKI3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tmf1B9EKI3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tmf1B9EKI3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Tmf1B9EKI3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Tmf1B9EKI3 Gm9910-201ENSMUST00000195385 1550 ntBASIC31.16■■■□□ 2.58
Tmf1B9EKI3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
Tmf1B9EKI3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Tmf1B9EKI3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.16■■■□□ 2.58
Tmf1B9EKI3 Terc-201ENSMUST00000082862 423 ntBASIC31.15■■■□□ 2.58
Tmf1B9EKI3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Tmf1B9EKI3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Tmf1B9EKI3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Tmf1B9EKI3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Tmf1B9EKI3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
Tmf1B9EKI3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Tmf1B9EKI3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Tmf1B9EKI3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Tmf1B9EKI3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.12■■■□□ 2.57
Tmf1B9EKI3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Tmf1B9EKI3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Tmf1B9EKI3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Tmf1B9EKI3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.1■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms