Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC12.83□□□□□ -0.35
Ubr4A2AN08 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC12.83□□□□□ -0.36
Ubr4A2AN08 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubr4A2AN08 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubr4A2AN08 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ubr4A2AN08 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ubr4A2AN08 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Gm12818-201ENSMUST00000117562 1349 ntBASIC12.82□□□□□ -0.36
Ubr4A2AN08 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ubr4A2AN08 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubr4A2AN08 Gm13241-201ENSMUST00000094493 780 ntBASIC12.81□□□□□ -0.36
Ubr4A2AN08 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubr4A2AN08 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubr4A2AN08 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubr4A2AN08 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ubr4A2AN08 Gm30023-201ENSMUST00000197970 889 ntBASIC12.81□□□□□ -0.36
Ubr4A2AN08 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ubr4A2AN08 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.8□□□□□ -0.36
Ubr4A2AN08 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ubr4A2AN08 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC12.79□□□□□ -0.36
Ubr4A2AN08 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.79□□□□□ -0.36
Ubr4A2AN08 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ubr4A2AN08 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.79□□□□□ -0.36
Ubr4A2AN08 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ubr4A2AN08 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC12.79□□□□□ -0.36
Ubr4A2AN08 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ubr4A2AN08 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubr4A2AN08 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubr4A2AN08 Gm43566-201ENSMUST00000196851 808 ntBASIC12.78□□□□□ -0.36
Ubr4A2AN08 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.78□□□□□ -0.36
Ubr4A2AN08 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubr4A2AN08 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ubr4A2AN08 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ubr4A2AN08 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ubr4A2AN08 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ubr4A2AN08 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ubr4A2AN08 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubr4A2AN08 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubr4A2AN08 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.74□□□□□ -0.37
Ubr4A2AN08 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubr4A2AN08 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.74□□□□□ -0.37
Ubr4A2AN08 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubr4A2AN08 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubr4A2AN08 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubr4A2AN08 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubr4A2AN08 Gm27801-201ENSMUST00000184174 223 ntBASIC12.73□□□□□ -0.37
Ubr4A2AN08 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ubr4A2AN08 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ubr4A2AN08 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.72□□□□□ -0.37
Ubr4A2AN08 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.72□□□□□ -0.37
Ubr4A2AN08 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ubr4A2AN08 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr4A2AN08 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr4A2AN08 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ubr4A2AN08 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ubr4A2AN08 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC12.7□□□□□ -0.38
Ubr4A2AN08 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr4A2AN08 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ubr4A2AN08 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ubr4A2AN08 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ubr4A2AN08 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ubr4A2AN08 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ubr4A2AN08 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ubr4A2AN08 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.68□□□□□ -0.38
Ubr4A2AN08 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr4A2AN08 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ubr4A2AN08 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ubr4A2AN08 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr4A2AN08 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr4A2AN08 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ubr4A2AN08 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ubr4A2AN08 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms