Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Scn2aA0A0J9YTW6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn2aA0A0J9YTW6 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.16■□□□□ 0.98
Scn2aA0A0J9YTW6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn2aA0A0J9YTW6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn2aA0A0J9YTW6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn2aA0A0J9YTW6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn2aA0A0J9YTW6 Gm4799-201ENSMUST00000095396 657 ntBASIC21.14■□□□□ 0.98
Scn2aA0A0J9YTW6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn2aA0A0J9YTW6 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.14■□□□□ 0.97
Scn2aA0A0J9YTW6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn2aA0A0J9YTW6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn2aA0A0J9YTW6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Mir6538-201ENSMUST00000183713 110 ntBASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn2aA0A0J9YTW6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scn2aA0A0J9YTW6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn2aA0A0J9YTW6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Scn2aA0A0J9YTW6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn2aA0A0J9YTW6 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.11■□□□□ 0.97
Scn2aA0A0J9YTW6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn2aA0A0J9YTW6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Scn2aA0A0J9YTW6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.11■□□□□ 0.97
Scn2aA0A0J9YTW6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn2aA0A0J9YTW6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.1■□□□□ 0.97
Scn2aA0A0J9YTW6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Scn2aA0A0J9YTW6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scn2aA0A0J9YTW6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn2aA0A0J9YTW6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Scn2aA0A0J9YTW6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Scn2aA0A0J9YTW6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Scn2aA0A0J9YTW6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn2aA0A0J9YTW6 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.08■□□□□ 0.96
Scn2aA0A0J9YTW6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Scn2aA0A0J9YTW6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn2aA0A0J9YTW6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Scn2aA0A0J9YTW6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Scn2aA0A0J9YTW6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Scn2aA0A0J9YTW6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Scn2aA0A0J9YTW6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn2aA0A0J9YTW6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.05■□□□□ 0.96
Scn2aA0A0J9YTW6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.05■□□□□ 0.96
Scn2aA0A0J9YTW6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scn2aA0A0J9YTW6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.04■□□□□ 0.96
Scn2aA0A0J9YTW6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2aA0A0J9YTW6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Scn2aA0A0J9YTW6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Scn2aA0A0J9YTW6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Scn2aA0A0J9YTW6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2aA0A0J9YTW6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2aA0A0J9YTW6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.03■□□□□ 0.96
Scn2aA0A0J9YTW6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.03■□□□□ 0.96
Scn2aA0A0J9YTW6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Scn2aA0A0J9YTW6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2aA0A0J9YTW6 Gm16437-201ENSMUST00000025669 507 ntBASIC21.02■□□□□ 0.96
Scn2aA0A0J9YTW6 Gm9812-201ENSMUST00000061934 968 ntBASIC21.02■□□□□ 0.96
Scn2aA0A0J9YTW6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scn2aA0A0J9YTW6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.01■□□□□ 0.95
Scn2aA0A0J9YTW6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scn2aA0A0J9YTW6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2aA0A0J9YTW6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21■□□□□ 0.95
Scn2aA0A0J9YTW6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21■□□□□ 0.95
Scn2aA0A0J9YTW6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2aA0A0J9YTW6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scn2aA0A0J9YTW6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scn2aA0A0J9YTW6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scn2aA0A0J9YTW6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Scn2aA0A0J9YTW6 Gm9806-201ENSMUST00000051080 552 ntBASIC20.98■□□□□ 0.95
Scn2aA0A0J9YTW6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Scn2aA0A0J9YTW6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2aA0A0J9YTW6 Gm11687-201ENSMUST00000118911 886 ntBASIC20.97■□□□□ 0.95
Scn2aA0A0J9YTW6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2aA0A0J9YTW6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2aA0A0J9YTW6 Scarna2-201ENSMUST00000157560 414 ntBASIC20.97■□□□□ 0.95
Scn2aA0A0J9YTW6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scn2aA0A0J9YTW6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2aA0A0J9YTW6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2aA0A0J9YTW6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scn2aA0A0J9YTW6 Terc-201ENSMUST00000082862 423 ntBASIC20.96■□□□□ 0.95
Scn2aA0A0J9YTW6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn2aA0A0J9YTW6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn2aA0A0J9YTW6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn2aA0A0J9YTW6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Scn2aA0A0J9YTW6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms