Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17,11■□□□□ 0,33
Trav19A0A0B4J1K4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17,11■□□□□ 0,33
Trav19A0A0B4J1K4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17,11■□□□□ 0,33
Trav19A0A0B4J1K4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17,11■□□□□ 0,33
Trav19A0A0B4J1K4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17,11■□□□□ 0,33
Trav19A0A0B4J1K4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17,11■□□□□ 0,33
Trav19A0A0B4J1K4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Gm30023-201ENSMUST00000197970 889 ntBASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17,1■□□□□ 0,33
Trav19A0A0B4J1K4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17,09■□□□□ 0,33
Trav19A0A0B4J1K4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17,09■□□□□ 0,33
Trav19A0A0B4J1K4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17,09■□□□□ 0,33
Trav19A0A0B4J1K4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17,09■□□□□ 0,33
Trav19A0A0B4J1K4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17,08■□□□□ 0,33
Trav19A0A0B4J1K4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17,08■□□□□ 0,32
Trav19A0A0B4J1K4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17,08■□□□□ 0,32
Trav19A0A0B4J1K4 Gm24970-201ENSMUST00000175582 82 ntBASIC17,08■□□□□ 0,32
Trav19A0A0B4J1K4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17,08■□□□□ 0,32
Trav19A0A0B4J1K4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17,08■□□□□ 0,32
Trav19A0A0B4J1K4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17,07■□□□□ 0,32
Trav19A0A0B4J1K4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17,07■□□□□ 0,32
Trav19A0A0B4J1K4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17,07■□□□□ 0,32
Trav19A0A0B4J1K4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17,06■□□□□ 0,32
Trav19A0A0B4J1K4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17,06■□□□□ 0,32
Trav19A0A0B4J1K4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17,06■□□□□ 0,32
Trav19A0A0B4J1K4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17,06■□□□□ 0,32
Trav19A0A0B4J1K4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17,05■□□□□ 0,32
Trav19A0A0B4J1K4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17,05■□□□□ 0,32
Trav19A0A0B4J1K4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17,05■□□□□ 0,32
Trav19A0A0B4J1K4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17,05■□□□□ 0,32
Trav19A0A0B4J1K4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17,04■□□□□ 0,32
Trav19A0A0B4J1K4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17,04■□□□□ 0,32
Trav19A0A0B4J1K4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17,03■□□□□ 0,32
Trav19A0A0B4J1K4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17,03■□□□□ 0,32
Trav19A0A0B4J1K4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17,03■□□□□ 0,32
Trav19A0A0B4J1K4 Gm9397-201ENSMUST00000200125 605 ntBASIC17,03■□□□□ 0,32
Trav19A0A0B4J1K4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17,03■□□□□ 0,32
Trav19A0A0B4J1K4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17,02■□□□□ 0,32
Trav19A0A0B4J1K4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Gm42699-201ENSMUST00000198104 1657 ntBASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17,01■□□□□ 0,31
Trav19A0A0B4J1K4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0,31
Trav19A0A0B4J1K4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0,31
Trav19A0A0B4J1K4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0,31
Trav19A0A0B4J1K4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0,31
Trav19A0A0B4J1K4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17■□□□□ 0,31
Trav19A0A0B4J1K4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16,99■□□□□ 0,31
Trav19A0A0B4J1K4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16,99■□□□□ 0,31
Trav19A0A0B4J1K4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16,99■□□□□ 0,31
Trav19A0A0B4J1K4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16,99■□□□□ 0,31
Trav19A0A0B4J1K4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16,99■□□□□ 0,31
Trav19A0A0B4J1K4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16,98■□□□□ 0,31
Trav19A0A0B4J1K4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16,98■□□□□ 0,31
Trav19A0A0B4J1K4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16,98■□□□□ 0,31
Trav19A0A0B4J1K4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16,98■□□□□ 0,31
Trav19A0A0B4J1K4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16,98■□□□□ 0,31
Trav19A0A0B4J1K4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16,98■□□□□ 0,31
Trav19A0A0B4J1K4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16,97■□□□□ 0,31
Trav19A0A0B4J1K4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16,97■□□□□ 0,31
Trav19A0A0B4J1K4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16,97■□□□□ 0,31
Trav19A0A0B4J1K4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16,97■□□□□ 0,31
Trav19A0A0B4J1K4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16,96■□□□□ 0,31
Trav19A0A0B4J1K4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Tdp2-203ENSMUST00000223804 1136 ntBASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16,95■□□□□ 0,3
Trav19A0A0B4J1K4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16,94■□□□□ 0,3
Trav19A0A0B4J1K4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16,94■□□□□ 0,3
Trav19A0A0B4J1K4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16,94■□□□□ 0,3
Trav19A0A0B4J1K4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16,94■□□□□ 0,3
Trav19A0A0B4J1K4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16,94■□□□□ 0,3
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms