Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.24■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.23■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.23■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.22■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tcrg-V4A0A0B4J1J8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tcrg-V4A0A0B4J1J8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.14■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.1■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tcrg-V4A0A0B4J1J8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms