Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-56A0A0A6YXG2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.35■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.33■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ighv1-56A0A0A6YXG2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ighv1-56A0A0A6YXG2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-56A0A0A6YXG2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ighv1-56A0A0A6YXG2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ighv1-56A0A0A6YXG2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-56A0A0A6YXG2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-56A0A0A6YXG2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ighv1-56A0A0A6YXG2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms