Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Gm37847-201ENSMUST00000192163 1497 ntBASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Gm31748-201ENSMUST00000194938 1497 ntBASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15,73■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Gm30023-201ENSMUST00000197970 889 ntBASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15,72■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15,71■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15,71■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15,71■□□□□ 0,11
Trav13-4-dv7A0A075B6C2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15,71■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15,71■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15,7■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15,7■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15,7■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15,7■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15,7■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC15,69■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15,69■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15,69■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15,69■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15,69■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15,69■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Gm9397-201ENSMUST00000200125 605 ntBASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15,68■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15,67■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Gm24970-201ENSMUST00000175582 82 ntBASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15,66■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15,65■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15,65■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15,65■□□□□ 0,1
Trav13-4-dv7A0A075B6C2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Particl-201ENSMUST00000205370 1560 ntBASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15,64■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15,63■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15,63■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15,63■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15,63■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15,63■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC15,62■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15,61■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC15,61■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15,61■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15,61■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15,61■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15,6■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Gm45855-201ENSMUST00000212546 880 ntBASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Tdp2-203ENSMUST00000223804 1136 ntBASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15,59■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15,58■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15,58■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15,58■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15,58■□□□□ 0,09
Trav13-4-dv7A0A075B6C2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15,58■□□□□ 0,09
Retrieved 100 of 76,532 protein–RNA pairs in 44,3 ms