Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6d-5A0A075B6B9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav6d-5A0A075B6B9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-5A0A075B6B9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-5A0A075B6B9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-5A0A075B6B9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-5A0A075B6B9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6d-5A0A075B6B9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Trav6d-5A0A075B6B9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav6d-5A0A075B6B9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav6d-5A0A075B6B9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6d-5A0A075B6B9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6d-5A0A075B6B9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6d-5A0A075B6B9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6d-5A0A075B6B9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6d-5A0A075B6B9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6d-5A0A075B6B9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6d-5A0A075B6B9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Gm30023-201ENSMUST00000197970 889 ntBASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6d-5A0A075B6B9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6d-5A0A075B6B9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav6d-5A0A075B6B9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-5A0A075B6B9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-5A0A075B6B9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-5A0A075B6B9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-5A0A075B6B9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-5A0A075B6B9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6d-5A0A075B6B9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trav6d-5A0A075B6B9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6d-5A0A075B6B9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trav6d-5A0A075B6B9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav6d-5A0A075B6B9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trav6d-5A0A075B6B9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav6d-5A0A075B6B9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trav6d-5A0A075B6B9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.51■□□□□ 0.55
Trav6d-5A0A075B6B9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6d-5A0A075B6B9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6d-5A0A075B6B9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.5■□□□□ 0.55
Trav6d-5A0A075B6B9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-5A0A075B6B9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-5A0A075B6B9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-5A0A075B6B9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6d-5A0A075B6B9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6d-5A0A075B6B9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-5A0A075B6B9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-5A0A075B6B9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-5A0A075B6B9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-5A0A075B6B9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.48■□□□□ 0.55
Trav6d-5A0A075B6B9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav6d-5A0A075B6B9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trav6d-5A0A075B6B9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6d-5A0A075B6B9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6d-5A0A075B6B9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav6d-5A0A075B6B9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.46■□□□□ 0.55
Trav6d-5A0A075B6B9 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.46■□□□□ 0.55
Trav6d-5A0A075B6B9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6d-5A0A075B6B9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav6d-5A0A075B6B9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.46■□□□□ 0.55
Trav6d-5A0A075B6B9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms