Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav18A0A075B656 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav18A0A075B656 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.75■□□□□ 0.59
Trav18A0A075B656 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav18A0A075B656 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav18A0A075B656 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav18A0A075B656 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav18A0A075B656 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Nkain2-201ENSMUST00000092602 558 ntBASIC18.74■□□□□ 0.59
Trav18A0A075B656 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav18A0A075B656 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trav18A0A075B656 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav18A0A075B656 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.73■□□□□ 0.59
Trav18A0A075B656 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav18A0A075B656 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav18A0A075B656 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav18A0A075B656 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav18A0A075B656 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav18A0A075B656 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav18A0A075B656 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav18A0A075B656 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav18A0A075B656 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav18A0A075B656 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav18A0A075B656 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav18A0A075B656 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav18A0A075B656 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.7■□□□□ 0.58
Trav18A0A075B656 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.7■□□□□ 0.58
Trav18A0A075B656 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav18A0A075B656 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav18A0A075B656 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav18A0A075B656 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav18A0A075B656 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav18A0A075B656 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav18A0A075B656 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav18A0A075B656 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav18A0A075B656 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav18A0A075B656 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.67■□□□□ 0.58
Trav18A0A075B656 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav18A0A075B656 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav18A0A075B656 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav18A0A075B656 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav18A0A075B656 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav18A0A075B656 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav18A0A075B656 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Trav18A0A075B656 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav18A0A075B656 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav18A0A075B656 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.64■□□□□ 0.57
Trav18A0A075B656 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav18A0A075B656 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav18A0A075B656 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.63■□□□□ 0.57
Trav18A0A075B656 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav18A0A075B656 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav18A0A075B656 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav18A0A075B656 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav18A0A075B656 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav18A0A075B656 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav18A0A075B656 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav18A0A075B656 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav18A0A075B656 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trav18A0A075B656 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav18A0A075B656 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trav18A0A075B656 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav18A0A075B656 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.62■□□□□ 0.57
Trav18A0A075B656 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav18A0A075B656 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav18A0A075B656 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav18A0A075B656 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trav18A0A075B656 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav18A0A075B656 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav18A0A075B656 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav18A0A075B656 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav18A0A075B656 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav18A0A075B656 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trav18A0A075B656 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav18A0A075B656 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.58■□□□□ 0.56
Trav18A0A075B656 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav18A0A075B656 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav18A0A075B656 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav18A0A075B656 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.57■□□□□ 0.56
Trav18A0A075B656 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav18A0A075B656 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav18A0A075B656 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav18A0A075B656 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav18A0A075B656 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav18A0A075B656 Gm37136-201ENSMUST00000194368 194 ntBASIC18.56■□□□□ 0.56
Trav18A0A075B656 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav18A0A075B656 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav18A0A075B656 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms