Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav4-2A0A075B638 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav4-2A0A075B638 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trav4-2A0A075B638 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav4-2A0A075B638 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav4-2A0A075B638 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav4-2A0A075B638 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav4-2A0A075B638 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav4-2A0A075B638 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trav4-2A0A075B638 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav4-2A0A075B638 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav4-2A0A075B638 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav4-2A0A075B638 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trav4-2A0A075B638 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav4-2A0A075B638 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Gm16148-201ENSMUST00000119653 893 ntBASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav4-2A0A075B638 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav4-2A0A075B638 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav4-2A0A075B638 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-2A0A075B638 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-2A0A075B638 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trav4-2A0A075B638 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-2A0A075B638 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav4-2A0A075B638 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trav4-2A0A075B638 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav4-2A0A075B638 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trav4-2A0A075B638 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4-2A0A075B638 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav4-2A0A075B638 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Gm8109-201ENSMUST00000194076 746 ntBASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav4-2A0A075B638 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav4-2A0A075B638 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav4-2A0A075B638 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav4-2A0A075B638 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav4-2A0A075B638 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trav4-2A0A075B638 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav4-2A0A075B638 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav4-2A0A075B638 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trav4-2A0A075B638 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Trav4-2A0A075B638 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav4-2A0A075B638 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav4-2A0A075B638 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav4-2A0A075B638 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav4-2A0A075B638 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trav4-2A0A075B638 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav4-2A0A075B638 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav4-2A0A075B638 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav4-2A0A075B638 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav4-2A0A075B638 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav4-2A0A075B638 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Trav4-2A0A075B638 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav4-2A0A075B638 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms