RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 A0A1W2PP18 115 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 UGDHO60701 494 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 C1orf105O95561 183 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 EGFP01133 1207 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 HOXB2P14652 356 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SLC2A4P14672 509 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 GNAZP19086 355 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 CAPN3P20807 821 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 DRD1P21728 446 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 IGFBP4P22692 258 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 DPP6P42658 865 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 GNPDA1P46926 289 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 THOP1P52888 689 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 RPS21P63220 83 aaKnown RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 GRSF1Q12849 480 aaKnown RBP eCLIP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 PON2Q15165 354 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 RFTN2Q52LD8 501 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SGO1Q5FBB7 561 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SELENOMQ8WWX9 145 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SPDL1Q96EA4 605 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 HOPXQ9BPY8 73 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 C8orf33Q9H7E9 229 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 EBF2Q9HAK2 575 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 FARSBQ9NSD9 589 aaKnown RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 INTS7Q9NVH2 962 aaKnown RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 PACSIN3Q9UKS6 424 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 EIF3LQ9Y262 564 aaKnown RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 DYTNA2CJ06 578 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 KRT87PA6NCN2 255 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SLC16A8O95907 504 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 PAK4O96013 591 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 POU3F3P20264 500 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 HALP42357 657 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 BDKRB1P46663 353 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 ERFP50548 548 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 UFM1P61960 85 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 PRKG2Q13237 762 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SGCGQ13326 291 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 CEACAM7Q14002 265 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 IL23RQ5VWK5 629 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 LAYNQ6UX15 382 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 THOC6Q86W42 341 aaKnown RBP16.82■□□□□ 0.28
PHGDH-208ENST00000641023 OR14C36Q8NHC7 312 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 SLC26A7Q8TE54 656 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 FOXJ1Q92949 421 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 PKP4Q99569 1192 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 GID8Q9NWU2 228 aa16.82■□□□□ 0.28
PHGDH-208ENST00000641023 G6PDP11413 515 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 TEAD1P28347 426 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 IMPA1P29218 277 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 PTDSS1P48651 473 aaKnown RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 POLR2JP52435 117 aaKnown RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 RPL38P63173 70 aaKnown RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 CHIT1Q13231 466 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 NAE1Q13564 534 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 INPP5AQ14642 412 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 LIPJQ5W064 366 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 KIAA1161Q6NSJ0 714 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 DOK6Q6PKX4 331 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 CHRDL2Q6WN34 429 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 C11orf96Q7Z7L8 435 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 AMZ2Q86W34 360 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 RGL4Q8IZJ4 473 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 PROKR1Q8TCW9 393 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 MTFMTQ96DP5 389 aaKnown RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 MED8Q96G25 268 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 TEX37Q96LM6 180 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 TEX101Q9BY14 249 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 WDR26Q9H7D7 661 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 ANGPTL2Q9UKU9 493 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 SCML1Q9UN30 329 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 DNMT3AQ9Y6K1 912 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 TRPM6Q9BX84 2022 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 FAM234BA2RU67 622 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 CCDC154A6NI56 674 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 GPR89AB7ZAQ6 455 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 E7ENX8 843 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 H3BQ06 376 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 TRIM38O00635 465 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 PLRG1O43660 514 aaKnown RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 SEC22BO75396 215 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 KLF8O95600 359 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 GPR89BP0CG08 455 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 TRIM23P36406 574 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 HMGCS1Q01581 520 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 IRF8Q02556 426 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 RPA4Q13156 261 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 CCNIQ14094 377 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 ADGRE1Q14246 886 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 FLOT2Q14254 428 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 NFE2L1Q14494 772 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 PLA2G4EQ3MJ16 856 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 CCSMST1Q4G0I0 132 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 C8orf82Q6P1X6 216 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-208ENST00000641023 CYP20A1Q6UW02 462 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 LRRTM4Q86VH4 590 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 RETREG3Q86VR2 466 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.81■□□□□ 0.285e-6■■■■■ 81.8
PHGDH-208ENST00000641023 KLHDC8AQ8IYD2 350 aa16.81■□□□□ 0.28
PHGDH-208ENST00000641023 RNF148Q8N7C7 305 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms