RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 CATSPERBQ9H7T0 1116 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ZNF556Q9HAH1 456 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 KCNK12Q9HB15 430 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 NIT2Q9NQR4 276 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 TMEM216Q9P0N5 145 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 EIF3KQ9UBQ5 218 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ACOT9Q9Y305 439 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CROCCQ5TZA2 2017 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CDK12Q9NYV4 1490 aaPredicted RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 DUOX2Q9NRD8 1548 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 EDDM13A0A1B0GTR0 161 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 LCHNA4D1U4 455 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 FAM83GA6ND36 823 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 STX16O14662 325 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 DHX15O43143 795 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 PSMD3O43242 534 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ZFPL1O95159 310 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 LDLRP01130 860 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 PCCBP05166 539 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 HNRNPA1P09651 372 aaKnown RBP eCLIP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 PLS3P13797 630 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ZNF250P15622 560 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CTSSP25774 331 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ACVR2AP27037 513 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 BDKRB2P30411 391 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CRATP43155 626 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CLCN5P51795 746 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 TMBIM6P55061 237 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 SOX10P56693 466 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 SLC1A5Q15758 541 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 SLC18A3Q16572 532 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 KNOP1Q1ED39 458 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 BCL7AQ4VC05 210 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 TBCELQ5QJ74 424 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ACER2Q5QJU3 275 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 BSPRYQ5W0U4 402 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ARL6IP4Q66PJ3 421 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CRTC3Q6UUV7 619 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CHST15Q7LFX5 561 aaPredicted RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 C12orf40Q86WS4 652 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 RCOR2Q8IZ40 523 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ZMIZ2Q8NF64 920 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 WDR48Q8TAF3 677 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 MARVELD3Q96A59 401 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 NARS2Q96I59 477 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ZBED3Q96IU2 234 aaPredicted RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 FAM71F1Q96KD3 344 aaPredicted RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ERGIC2Q96RQ1 377 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ABHD1Q96SE0 405 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 NAT9Q9BTE0 207 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CFHR5Q9BXR6 569 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 MTIF3Q9H2K0 278 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 IGFLR1Q9H665 355 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 DDX31Q9H8H2 851 aaKnown RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 B3GNT2Q9NY97 397 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 CDH22Q9UJ99 828 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ADAM28Q9UKQ2 775 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ABCG2Q9UNQ0 655 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 POFUT2Q9Y2G5 429 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 PCDHGA5Q9Y5G8 931 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 KLF2Q9Y5W3 355 aaPredicted RBP6.04□□□□□ -1.44
NECAP1-222ENST00000640072 TET3O43151 1660 aa6.04□□□□□ -1.44
NECAP1-222ENST00000640072 ABCC3O15438 1527 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 CNTNAP2Q9UHC6 1331 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 FAM237BA0A1B0GVD1 139 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 METTL21EPA6NDL7 271 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 BTBD18B2RXH4 712 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 GRM8O00222 908 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 PDE9AO76083 593 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 TCF4P15884 667 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 TECP42680 631 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 TEKQ02763 1124 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 TMEM119Q4V9L6 283 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 HSD17B12Q53GQ0 312 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 PAN3Q58A45 887 aaKnown RBP6.03□□□□□ -1.44
NECAP1-222ENST00000640072 NHSL2Q5HYW2 709 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 UBAP2Q5T6F2 1119 aaKnown RBP6.03□□□□□ -1.44
NECAP1-222ENST00000640072 ATPAF1Q5TC12 328 aaPredicted RBP6.03□□□□□ -1.44
NECAP1-222ENST00000640072 RAP1GAP2Q684P5 730 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 SPESP1Q6UW49 350 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 MFSD7Q6UXD7 560 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 SCARA5Q6ZMJ2 495 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 RNF111Q6ZNA4 994 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 ZBTB49Q6ZSB9 765 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 RD3Q7Z3Z2 195 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 VASH2Q86V25 355 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 FBXO11Q86XK2 927 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 SLC9A9Q8IVB4 645 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 MCATQ8IVS2 390 aaKnown RBP6.03□□□□□ -1.44
NECAP1-222ENST00000640072 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 OR6Q1Q8NGQ2 317 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 FIBINQ8TAL6 211 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 ZFP90Q8TF47 636 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 CYGBQ8WWM9 190 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 NR4A3Q92570 626 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 CPNE4Q96A23 557 aaPredicted RBP6.03□□□□□ -1.44
NECAP1-222ENST00000640072 GLT1D1Q96MS3 346 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 WDR77Q9BQA1 342 aaPredicted RBP6.03□□□□□ -1.44
NECAP1-222ENST00000640072 MIR1-1HGQ9H1L0 117 aa6.03□□□□□ -1.44
NECAP1-222ENST00000640072 NANOGQ9H9S0 305 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms