RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 KCTD14Q9BQ13 255 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 CENPKQ9BS16 269 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 INTS7Q9NVH2 962 aaKnown RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 TRPS1Q9UHF7 1281 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 PCDHGB4Q9UN71 923 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 AURKCQ9UQB9 309 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 POLR3HQ9Y535 204 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 PCDHGB5Q9Y5G0 923 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 ARNTLO00327 626 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 IFRD1O00458 451 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-215ENST00000639856 RGS14O43566 566 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 STK16O75716 305 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 WDR47O94967 919 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 KAT7O95251 611 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 PRNPP04156 253 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 IL10P22301 178 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 JAK1P23458 1154 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 GRIA2P42262 883 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 SOX9P48436 509 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 RPIAP49247 311 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 SMU1Q2TAY7 513 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 CDKL4Q5MAI5 379 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 CES5AQ6NT32 575 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 SLC2A7Q6PXP3 512 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 LIPIQ6XZB0 460 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 MBOAT1Q6ZNC8 495 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 HID1Q8IV36 788 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 HOMEZQ8IX15 550 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 OR8D1Q8WZ84 308 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 TMEM74Q96NL1 305 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 TSC22D3Q99576 134 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 SLC29A1Q99808 456 aa14.74□□□□□ -0.05
TRIM3-215ENST00000639856 LOC730098B7Z3J9 87 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 SLC28A1O00337 649 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 FFAR3O14843 346 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 GPR42O15529 346 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 ULK1O75385 1050 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 GPIP06744 558 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 ELFN1P0C7U0 828 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 SLC2A4P14672 509 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 AOAHP28039 575 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 AKT1P31749 480 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 PIK3CGP48736 1102 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 DCDC1P59894 354 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 ELAVL3Q14576 367 aaKnown RBP14.73□□□□□ -0.05
TRIM3-215ENST00000639856 HENMT1Q5T8I9 393 aaKnown RBP14.73□□□□□ -0.05
TRIM3-215ENST00000639856 EGFLAMQ63HQ2 1017 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 TRIM46Q7Z4K8 759 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 TECPR1Q7Z6L1 1165 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 ADGRG5Q8IZF4 528 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 OSBPL11Q9BXB4 747 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 FARSBQ9NSD9 589 aaKnown RBP14.73□□□□□ -0.05
TRIM3-215ENST00000639856 CLDND1Q9NY35 253 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 KLQ9UEF7 1012 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 COQ6Q9Y2Z9 468 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 RNF11Q9Y3C5 154 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 DENND4AQ7Z401 1863 aa14.73□□□□□ -0.05
TRIM3-215ENST00000639856 RSL1D1O76021 490 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 TNFAIP8O95379 198 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 SMIM18P0DKX4 95 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 MTHFD1P11586 935 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ITGB7P26010 798 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 VARSP26640 1264 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 HTR1EP28566 365 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 RPL38P63173 70 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 MYBPC1Q00872 1141 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 CREB5Q02930 508 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 PRKCQQ04759 706 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 MAD2L1Q13257 205 aaPredicted RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 GK3PQ14409 553 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 GBX1Q14549 363 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ACOX1Q15067 660 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 AASDHQ4L235 1098 aaPredicted RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 PPP4R4Q6NUP7 873 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ERAP2Q6P179 960 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 TTC23LQ6PF05 361 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 DLEU7Q6UYE1 221 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ZBTB49Q6ZSB9 765 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 MMAAQ8IVH4 418 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 HCAR2Q8TDS4 363 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ELSPBP1Q96BH3 223 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 SLC32A1Q9H598 525 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 AGPAT4Q9NRZ5 378 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ARL15Q9NXU5 204 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ZNF490Q9ULM2 529 aaPredicted RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 PDE10AQ9Y233 779 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 EIF3LQ9Y262 564 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 TICRRQ7Z2Z1 1910 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 INPP4BO15327 924 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 EPHX1P07099 455 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 FAM58BPP0C7Q3 252 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 CKMT2P17540 419 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 OXTRP30559 389 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 GGT5P36269 586 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 PEX19P40855 299 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 FXNQ16595 210 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 CYP51A1Q16850 503 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 CACUL1Q86Y37 369 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 CHERPQ8IWX8 916 aaKnown RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 TMIEQ8NEW7 156 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms