RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 RBMXL3Q8N7X1 1067 aaKnown RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 SGSM3Q96HU1 749 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 HES6Q96HZ4 224 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 C17orf62Q9BQA9 187 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 ETNK1Q9HBU6 452 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 DHCR7Q9UBM7 475 aaKnown RBP16.26■□□□□ 0.19
SMN2-216ENST00000638794 CAPN6Q9Y6Q1 641 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 HIVEP3Q5T1R4 2406 aa16.26■□□□□ 0.19
SMN2-216ENST00000638794 ISM1B1AKI9 464 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 SUN1O94901 812 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 AGFG2O95081 481 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 GOT2P00505 430 aaKnown RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 GRIA1P42261 906 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 OASLQ15646 514 aaKnown RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 INPP5JQ15735 1006 aaPredicted RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 SLC5A12Q1EHB4 618 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 TSTD2Q5T7W7 516 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 FHL5Q5TD97 284 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 LYPLAL1Q5VWZ2 237 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 SLC6A19Q695T7 634 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 AFTPHQ6ULP2 937 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 HPS6Q86YV9 775 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 FAM20CQ8IXL6 584 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 ZNF655Q8N720 491 aaPredicted RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 PROKR1Q8TCW9 393 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 PNPLA2Q96AD5 504 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 LRRC4CQ9HCJ2 640 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 SLAMF7Q9NQ25 335 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 GPN3Q9UHW5 284 aaPredicted RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 CDYLQ9Y232 598 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 PTRH2Q9Y3E5 179 aaKnown RBP16.25■□□□□ 0.19
SMN2-216ENST00000638794 NUP210LQ5VU65 1888 aa16.25■□□□□ 0.19
SMN2-216ENST00000638794 PCM1Q15154 2024 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 LIASO43766 372 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 CNOT3O75175 753 aaKnown RBP16.24■□□□□ 0.19
SMN2-216ENST00000638794 GAS8O95995 478 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 IFNB1P01574 187 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 PKLRP30613 574 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 STIP1P31948 543 aaKnown RBP16.24■□□□□ 0.19
SMN2-216ENST00000638794 CCR7P32248 378 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 FOXL2P58012 376 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 DCDP81605 110 aaKnown RBP16.24■□□□□ 0.19
SMN2-216ENST00000638794 ACVR1Q04771 509 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 SEMA3AQ14563 771 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 SSPNQ14714 243 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 SLC9A5Q14940 896 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 KIR2DS3Q14952 304 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 KYNUQ16719 465 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 TLDC1Q6P9B6 456 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 PPP1R21Q6ZMI0 780 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 ZNF534Q76KX8 674 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 VRK3Q8IV63 474 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 SLC22A15Q8IZD6 547 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 DNAJC22Q8N4W6 341 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 OR4L1Q8NH43 312 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 LKAAEAR1Q8TD35 194 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 IP6K3Q96PC2 410 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 RANBP9Q96S59 729 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 TTC1Q99614 292 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 TXLNGQ9NUQ3 528 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 IRAK4Q9NWZ3 460 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 IFT80Q9P2H3 777 aaPredicted RBP16.24■□□□□ 0.19
SMN2-216ENST00000638794 RIMKLBQ9ULI2 386 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 SRPK3Q9UPE1 567 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 TEX15Q9BXT5 2789 aa16.24■□□□□ 0.19
SMN2-216ENST00000638794 E7EVH7 732 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 KDM1AO60341 852 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 MAGP20916 626 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 ADRA1DP25100 572 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 FDFT1P37268 417 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 FOLR3P41439 243 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 RAB28P51157 221 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 HSPA14Q0VDF9 509 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 NKAIN1Q4KMZ8 207 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 DNAJC21Q5F1R6 531 aaKnown RBP16.23■□□□□ 0.19
SMN2-216ENST00000638794 DCAF10Q5QP82 559 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 VWA5B1Q5TIE3 1220 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 PRUNE1Q86TP1 453 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 TMEM151BQ8IW70 566 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 TXLNBQ8N3L3 684 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 LINC01555Q8NAE3 123 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 OR2Y1Q8NGV0 311 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 OR6P1Q8NGX9 317 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 MENTQ9BUN1 341 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 AP1M1Q9BXS5 423 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 CASS4Q9NQ75 786 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 NDOR1Q9UHB4 597 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 CIDEBQ9UHD4 219 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 PLCL2Q9UPR0 1127 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 KLHL20Q9Y2M5 609 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 TCAF1Q9Y4C2 921 aa16.23■□□□□ 0.19
SMN2-216ENST00000638794 IQCF5A8MTL0 148 aa16.22■□□□□ 0.19
SMN2-216ENST00000638794 TCP11X1B4DZS4 312 aa16.22■□□□□ 0.19
SMN2-216ENST00000638794 F8W8V4 182 aa16.22■□□□□ 0.19
SMN2-216ENST00000638794 SEMA7AO75326 666 aa16.22■□□□□ 0.19
SMN2-216ENST00000638794 GPC4O75487 556 aa16.22■□□□□ 0.19
SMN2-216ENST00000638794 ETS1P14921 441 aa16.22■□□□□ 0.19
SMN2-216ENST00000638794 FASTKD1Q53R41 847 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms