RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 KPNA5O15131 536 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 KIAA0754O94854 1291 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 SLCO2B1O94956 709 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 SEC31AO94979 1220 aaKnown RBP15.48■□□□□ 0.07
BRCA1-228ENST00000618469 DLGAP3O95886 979 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PKMP14618 531 aaKnown RBP15.48■□□□□ 0.07
BRCA1-228ENST00000618469 FOLR1P15328 257 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 ZNF28P17035 718 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 WT1P19544 449 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-228ENST00000618469 CHRM3P20309 590 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PRDX3P30048 256 aaKnown RBP15.48■□□□□ 0.07
BRCA1-228ENST00000618469 BDKRB1P46663 353 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 ITGA8P53708 1063 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 ADARP55265 1226 aaKnown RBP15.48■□□□□ 0.07
BRCA1-228ENST00000618469 MPP1Q00013 466 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 ACY1Q03154 408 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 C2orf54Q08AI8 447 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PLEKHS1Q5SXH7 462 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 SPESP1Q6UW49 350 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 UNC5AQ6ZN44 842 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 TRIM73Q86UV7 250 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 UNC5BQ8IZJ1 945 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PDIK1LQ8N165 341 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 D2HGDHQ8N465 521 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 CALML6Q8TD86 181 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PWWP2AQ96N64 755 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 EBNA1BP2Q99848 306 aaKnown RBP15.48■□□□□ 0.07
BRCA1-228ENST00000618469 KLHL25Q9H0H3 589 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 CCDC68Q9H2F9 335 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PDE7BQ9NP56 450 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 C1GALT1Q9NS00 363 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 FGF21Q9NSA1 209 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 LNPEPQ9UIQ6 1025 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 CHMP2BQ9UQN3 213 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 BTRCQ9Y297 605 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PCDHGA4Q9Y5G9 962 aa15.48■□□□□ 0.07
BRCA1-228ENST00000618469 PIPSLA2A3N6 862 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 EFCAB8A8MWE9 144 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 S1PR4O95977 384 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 CHRM5P08912 532 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-228ENST00000618469 TPBGLP0DKB5 382 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 FGF5P12034 268 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 LIFP15018 202 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 PVRP15151 417 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 ST6GAL1P15907 406 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 UGT2B7P16662 529 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 PKLRP30613 574 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 MRPS25P82663 173 aaKnown RBP15.47■□□□□ 0.07
BRCA1-228ENST00000618469 GPR19Q15760 415 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 TBR1Q16650 682 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 HIF1AQ16665 826 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.47■□□□□ 0.07
BRCA1-228ENST00000618469 HSP90AA5PQ58FG0 334 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 TMTC4Q5T4D3 741 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 HIBCHQ6NVY1 386 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-228ENST00000618469 CNSTQ6PJW8 725 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 TIPARPQ7Z3E1 657 aaKnown RBP15.47■□□□□ 0.07
BRCA1-228ENST00000618469 LMNTD2Q8IXW0 634 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 ZBTB2Q8N680 514 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 CFAP36Q96G28 342 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 NAT9Q9BTE0 207 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 PITPNM3Q9BZ71 974 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 SPRY4Q9C004 299 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 IARS2Q9NSE4 1012 aaKnown RBP15.47■□□□□ 0.07
BRCA1-228ENST00000618469 SPHK1Q9NYA1 384 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 OR6C2Q9NZP2 312 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 NFS1Q9Y697 457 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 FAM169AQ9Y6X4 670 aa15.47■□□□□ 0.07
BRCA1-228ENST00000618469 SMAPO00193 183 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 SPAG6O75602 509 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 TIAF1O95411 115 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 TTC4O95801 387 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 RPL21P46778 160 aaKnown RBP15.46■□□□□ 0.07
BRCA1-228ENST00000618469 RAB28P51157 221 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 TUBB4BP68371 445 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 TUBB2AQ13885 445 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 IGFBP7Q16270 282 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 SPANXN3Q5MJ09 141 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 HP1BP3Q5SSJ5 553 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-228ENST00000618469 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 ESX1Q8N693 406 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 GALNT6Q8NCL4 622 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 SPATA4Q8NEY3 305 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 KIAA1143Q96AT1 154 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-228ENST00000618469 C16orf45Q96MC5 204 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-228ENST00000618469 FOPNLQ96NB1 174 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 IL17FQ96PD4 163 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 WDR83Q9BRX9 315 aaKnown RBP15.46■□□□□ 0.07
BRCA1-228ENST00000618469 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 FANCEQ9HB96 536 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 GALPQ9UBC7 116 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 FBXO5Q9UKT4 447 aa15.46■□□□□ 0.07
BRCA1-228ENST00000618469 KRT87PA6NCN2 255 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ISM1B1AKI9 464 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ERVK-10P10266 1014 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 MAP4P27816 1152 aaKnown RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ATP5DP30049 168 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 PEBP1P30086 187 aaKnown RBP15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ELK3P41970 407 aa15.45■□□□□ 0.06
BRCA1-228ENST00000618469 ARL4CP56559 192 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms