RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 HNMTP50135 292 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 AQP5P55064 265 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 BNIP1Q12981 228 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 C1orf61Q13536 156 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 SIM2Q14190 667 aaPredicted RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 RCN2Q14257 317 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.279e-7■■■■□ 24.1
TMEM254-213ENST00000613758 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PRAMEF14Q5SWL7 426 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TAF8Q7Z7C8 310 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TCAIMQ8N3R3 496 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PPP4R1Q8TF05 950 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PIGKQ92643 395 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 FBXL8Q96CD0 374 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 FERD3LQ96RJ6 166 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 C1QTNF3Q9BXJ4 246 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 CD244Q9BZW8 370 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TRIT1Q9H3H1 467 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 IMP3Q9NV31 184 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 SUSD2Q9UGT4 822 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 HAO1Q9UJM8 370 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PCOLCE2Q9UKZ9 415 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PCDHGA2Q9Y5H1 932 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 LRP4O75096 1905 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 OR52A4PA6NMU1 304 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 MYO1CO00159 1063 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 HSPA4LO95757 839 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 CELA2BP08218 269 aaPredicted RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 RPS17P08708 135 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 SERPINB5P36952 375 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 SCTRP47872 440 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 PRKG2Q13237 762 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 RPE65Q16518 533 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 ARL13AQ5H913 290 aaPredicted RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 DUS1LQ6P1R4 473 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 DCUN1D3Q8IWE4 304 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TBC1D21Q8IYX1 336 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 OR9A1PQ8NGU1 263 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 LRRC37BQ96QE4 947 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 EBF4Q9BQW3 602 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TMEM79Q9BSE2 394 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 LRRC61Q9BV99 259 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 GSTO2Q9H4Y5 243 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TAAR2Q9P1P5 351 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 TDRKHQ9Y2W6 561 aaKnown RBP13.39□□□□□ -0.27
TMEM254-213ENST00000613758 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
TMEM254-213ENST00000613758 SERPINB3P29508 390 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 GGT5P36269 586 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 CDH13P55290 713 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 TUBB3Q13509 450 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 KRT33BQ14525 404 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 ZXDCQ2QGD7 858 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 FRMD7Q6ZUT3 714 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SYT12Q8IV01 421 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 WDR75Q8IWA0 830 aaKnown RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 UBTD2Q8WUN7 234 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 ATL1Q8WXF7 558 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 RAD51AP1Q96B01 352 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 PRR11Q96HE9 360 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 NSUN5Q96P11 429 aaKnown RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SIKE1Q9BRV8 207 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 PCTPQ9UKL6 214 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 RAP2CQ9Y3L5 183 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 HEBP2Q9Y5Z4 205 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SDK1Q7Z5N4 2213 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 TRBV23OR9-2A0A075B6M9 112 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 A6NCN8 305 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 CCNT2O60583 730 aaKnown RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 STK16O75716 305 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SLC16A8O95907 504 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 MTHFD1P11586 935 aaKnown RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 F3P13726 295 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 TSPAN8P19075 237 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 MPSTP25325 297 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 GDF5P43026 501 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 NAA20P61599 178 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 CLCQ05315 142 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 ELOCQ15369 112 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 KIF19Q2TAC6 998 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 AGTRAPQ6RW13 159 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 PRR23BQ6ZRT6 265 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 GBP7Q8N8V2 638 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 LMX1AQ8TE12 382 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 ZNF483Q8TF39 744 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SHCBP1LQ9BZQ2 653 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 MVB12BQ9H7P6 319 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 STOX2Q9P2F5 926 aaPredicted RBP13.38□□□□□ -0.27
TMEM254-213ENST00000613758 ZDHHC2Q9UIJ5 367 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SNX11Q9Y5W9 270 aa13.38□□□□□ -0.27
TMEM254-213ENST00000613758 SPAG17Q6Q759 2223 aa13.37□□□□□ -0.27
TMEM254-213ENST00000613758 PRR33A8MZF0 331 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms