RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 CDKL4Q5MAI5 379 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 PERM1Q5SV97 790 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 KLC3Q6P597 504 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 TTC23LQ6PF05 361 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 EFL1Q7Z2Z2 1120 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 GLRX5Q86SX6 157 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 ZNF761Q86XN6 746 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 GPSM1Q86YR5 675 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 HMGCLL1Q8TB92 370 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 CCDC74AQ96AQ1 378 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 APOPT1Q96IL0 206 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 CCDC138Q96M89 665 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 SMC6Q96SB8 1091 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 SLC38A3Q99624 504 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 NRTNQ99748 197 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 TBC1D10AQ9BXI6 508 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 CENPHQ9H3R5 247 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 SSU72Q9NP77 194 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 SPATA7Q9P0W8 599 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 XPR1Q9UBH6 696 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 ICKQ9UPZ9 632 aa12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 TDRKHQ9Y2W6 561 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 ZFC3H1O60293 1989 aaKnown RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 ARHGEF17Q96PE2 2063 aaPredicted RBP12.28□□□□□ -0.44
CHMP2A-206ENST00000600118 ASCC3Q8N3C0 2202 aaKnown RBP12.27□□□□□ -0.44
CHMP2A-206ENST00000600118 CPED1A4D0V7 1026 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 COPEO14579 308 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 B4GAT1O43505 415 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 KLK8O60259 260 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 OPA1O60313 960 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 SLC16A8O95907 504 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 SYF2O95926 243 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 GP1BAP07359 652 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 CSRP1P21291 193 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 IMPA1P29218 277 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 CCT5P48643 541 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 ACADVLP49748 655 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 RAB28P51157 221 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 KPNA2P52292 529 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 BIRC2Q13490 618 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 SQSTM1Q13501 440 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 ARHGAP19Q14CB8 494 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 N4BP2L1Q5TBK1 243 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 C16orf46Q6P387 395 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 MBOAT1Q6ZNC8 495 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 SPRED1Q7Z699 444 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 AMIGO1Q86WK6 493 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 LRRC56Q8IYG6 542 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 LINC01555Q8NAE3 123 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 ZNF480Q8WV37 535 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 LCN9Q8WX39 176 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 JPH3Q8WXH2 748 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 FBXL8Q96CD0 374 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 TSNARE1Q96NA8 513 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 IL17FQ96PD4 163 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 TRIM54Q9BYV2 358 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 MRPL46Q9H2W6 279 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 ARL15Q9NXU5 204 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 UTP6Q9NYH9 597 aaKnown RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 NUDT4Q9NZJ9 180 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 OR6C2Q9NZP2 312 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 OGFRQ9NZT2 677 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 STOX2Q9P2F5 926 aaPredicted RBP12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 CIDEBQ9UHD4 219 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 RNF112Q9ULX5 631 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 PLAGL1Q9UM63 463 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 PLLPQ9Y342 182 aa12.27□□□□□ -0.45
CHMP2A-206ENST00000600118 IGHV1OR21-1A0A087WYE8 117 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 SYCE1LA8MT33 242 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 E7ENX8 843 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 TK2O00142 265 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 KDM1AO60341 852 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 PLIN3O60664 434 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 PROCP04070 461 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 HIST1H2AGP0C0S8 130 aaPredicted RBP12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 HIST1H2ADP20671 130 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 SHMT2P34897 504 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 HSD17B2P37059 387 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 OR1D5P58170 312 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 MAGOHP61326 146 aaKnown RBP12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 GPLD1P80108 840 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 TAP2Q03519 686 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 TTMPQ5BVD1 217 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 ADGRF3Q8IZF5 1079 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 PDPRQ8NCN5 879 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 DEFB124Q8NES8 71 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 OR4E2Q8NGC2 313 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 OR2L8Q8NGY9 312 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 IFI44Q8TCB0 444 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 RHBDF1Q96CC6 855 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 SCYL1Q96KG9 808 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 HIST1H2AHQ96KK5 128 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 ATP6V1G3Q96LB4 118 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 HIST1H2AJQ99878 128 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 CCDC3Q9BQI4 270 aa12.26□□□□□ -0.45
CHMP2A-206ENST00000600118 H2AFJQ9BTM1 129 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms