RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TMEM63AO94886 807 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 TIAF1O95411 115 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 FTCDO95954 541 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 ALPPP05187 535 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 PECAM1P16284 738 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A6P19224 532 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 CYP2A7P20853 494 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 AGXTP21549 392 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 CDH3P22223 829 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A1P22309 533 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A4P22310 534 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 GNLYP22749 145 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 PBLDP30039 288 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 PREPP48147 710 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 NFE2L1Q14494 772 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 PRKD1Q15139 912 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 SLC1A5Q15758 541 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 KHDC1Q4VXA5 237 aaKnown RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 TFDP3Q5H9I0 405 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 SIRPB2Q5JXA9 342 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 FAM199XQ6PEV8 388 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 C4orf22Q6V702 233 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 HOOK3Q86VS8 718 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 RAB43Q86YS6 212 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 LURAP1LQ8IV03 231 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 CNPY4Q8N129 248 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 RASGEF1CQ8N431 466 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 TTC30BQ8N4P2 665 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 SLC25A41Q8N5S1 370 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 OR2L2Q8NH16 312 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF398Q8TD17 642 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 KRT35Q92764 455 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 N4BP2L2Q92802 583 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 ULK4Q96C45 1275 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF501Q96CX3 271 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-226ENST00000591534 RNF31Q96EP0 1072 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 PPP1R2P1Q96PQ5 205 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 FCRL5Q96RD9 977 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 DHRS4Q9BTZ2 278 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 WWP1Q9H0M0 922 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 TSPYL1Q9H0U9 437 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A7Q9HAW7 530 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A10Q9HAW8 530 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 UGT1A8Q9HAW9 530 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 MLXIPLQ9NP71 852 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 C1GALT1Q9NS00 363 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 SLC24A2Q9UI40 661 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 TMPRSS11EQ9UL52 423 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 BTRCQ9Y297 605 aa9.17□□□□□ -0.94
BRCA1-226ENST00000591534 C5orf60A6NFR6 353 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 HACD1B0YJ81 288 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CST8O60676 142 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ERLIN1O75477 346 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 STK10O94804 968 aaKnown RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 PRAMEF1O95521 474 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CRTAMO95727 393 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 GAS8O95995 478 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CELA3AP09093 270 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 MSL3P1P0C860 447 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CDKN2BP42772 138 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CTSCP53634 463 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 GEMP55040 296 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 PPP1CAP62136 330 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 DHX34Q14147 1143 aaKnown RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 PRPSAP1Q14558 356 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 INPP5JQ15735 1006 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 GPR19Q15760 415 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 BCL7AQ4VC05 210 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ITPRIPL1Q6GPH6 555 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ZNF517Q6ZMY9 492 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CCDC50Q8IVM0 306 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CFAP206Q8IYR0 622 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 GPR135Q8IZ08 494 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 DSELQ8IZU8 1212 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ENDOVQ8N8Q3 282 aaKnown RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 EIF1ADQ8N9N8 165 aaKnown RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 BBOF1Q8ND07 529 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ACVR1CQ8NER5 493 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 IPMKQ8NFU5 416 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 GPR150Q8NGU9 434 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 LCN9Q8WX39 176 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 TM9SF4Q92544 642 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 PNPLA2Q96AD5 504 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 SGSM3Q96HU1 749 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 LINC00615Q96LM1 132 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 FER1L6-AS2Q96M78 137 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 TRIM55Q9BYV6 548 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 RAB17Q9H0T7 212 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 CHST8Q9H2A9 424 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 SRMSQ9H3Y6 488 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ASB8Q9H765 288 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ACTR5Q9H9F9 607 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 GPR83Q9NYM4 423 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 C5AR2Q9P296 337 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 RSPH14Q9UHP6 348 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 TCFL5Q9UL49 500 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 AAR2Q9Y312 384 aaKnown RBP9.16□□□□□ -0.94
BRCA1-226ENST00000591534 DOPEY2Q9Y3R5 2298 aa9.16□□□□□ -0.94
BRCA1-226ENST00000591534 ELOA3CA0A087WX78 387 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-226ENST00000591534 C17orf113A0A1B0GUU1 675 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms